Single-cell Case Control Analysis
☆59Feb 26, 2026Updated 5 months ago
Alternatives and similar repositories for cacoa
Users that are interested in cacoa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆67Apr 14, 2024Updated 2 years ago
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆230Jul 2, 2026Updated last month
- Efficient and precise single-cell reference atlas mapping with Symphony☆125May 24, 2026Updated 2 months ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆60Jan 29, 2026Updated 6 months ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆48Mar 1, 2024Updated 2 years ago
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆15Updated this week
- Automated ingestion and conversion of various single-cell data formats, within and across species☆16Jan 26, 2026Updated 6 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆82Aug 17, 2024Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆132Updated this week
- https://molecular-neurogenetics.github.io/truster/☆12Jul 14, 2025Updated last year
- R package implementation of Milo for testing for differential abundance in KNN graphs☆442May 11, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆34Nov 28, 2025Updated 8 months ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆24Jul 6, 2023Updated 3 years ago
- Multiome GRN inference.