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Related projects: ⓘ

• BaderLab / AgingMouseBrainCCInx
  Predicted cell-cell interactions of the aging mouse brain
  ☆19Updated 4 years ago
• theislab / pseudodynamics
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• KChen-lab / SCMER
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  ☆23Updated 8 months ago
• KenLauLab / dropkick
  Automated cell filtering for single-cell RNA sequencing data
  ☆24Updated 10 months ago
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  ☆16Updated 3 years ago
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  ☆22Updated 5 years ago
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  ☆28Updated 6 months ago
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  ☆18Updated 4 years ago
• quon-titative-biology / scAlign
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  ☆34Updated 2 years ago
• markrobinsonuzh / scRNAseq_clustering_comparison
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  ☆41Updated 2 months ago
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  ☆27Updated 3 months ago
• SpatialTranscriptomicsResearch / st_viewer
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  ☆13Updated 3 years ago
• pachterlab / BHGP_2022
  ☆21Updated 2 years ago
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  A guide to using the Python scRNA-seq analysis package Scanpy from R
  ☆13Updated 4 years ago
• SpatialTranscriptomicsResearch / std-nb
  Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018
  ☆21Updated 5 years ago
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  ☆16Updated 5 years ago
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  Dynamical systems methods for RNA velocity analysis
  ☆23Updated 3 years ago
• forrest-lab / NATMI
  NATMI: Network Analysis Toolkit for the Multicellular Interactions
  ☆33Updated 3 years ago
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  ☆47Updated 4 years ago
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  Parse ArchR arrow files to anndata h5ad
  ☆13Updated 9 months ago
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  ☆15Updated 7 years ago
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  ☆19Updated 5 years ago
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  Clone of the Bioconductor repository for the scRNAseq package.
  ☆23Updated 2 months ago
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  Single Cell Epigenome-based Inference of Activity
  ☆19Updated 11 months ago
• MSingerLab / COMETSC
  COMET Single-Cell Marker Detection tool
  ☆31Updated 2 years ago