martinjzhang / scDRSLinks
Single-cell disease relevance score (scDRS)
☆172Updated 4 months ago
Alternatives and similar repositories for scDRS
Users that are interested in scDRS are comparing it to the libraries listed below
Sorting:
- AUCell: score single cells with gene regulatory networks☆182Updated last year
- Significance analysis for clustering single-cell RNA-sequencing data☆123Updated last year
- The integration of single cell rank-based gene set enrichment analysis☆142Updated 6 months ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆96Updated 4 years ago
- Methods to discover gene programs on single-cell data☆170Updated 3 months ago
- MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell trans…☆179Updated 5 months ago
- scDIOR: Single cell data IO softwaRe☆153Updated 3 years ago
- A Bayesian model for compositional single-cell data analysis☆185Updated 2 years ago
- Analysis of cell-cell communication at single-cell resolution☆106Updated last year
- Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease☆63Updated last year
- CELLECT (CELL-type Expression-specific integration for Complex Traits)☆91Updated last year
- Direct estimation of mean and covariance from single cell RNA seq experiments☆126Updated 8 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 8 months ago
- Methods to compute Local Inverse Simpson's Index (LISI)☆72Updated 4 years ago
- single cell Flux Estimation Analysis (scFEA) Try the below web server!☆141Updated 2 years ago
- ☆181Updated 8 months ago
- Multiome GRN inference.☆131Updated last year
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆121Updated last month
- In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes☆119Updated 2 months ago
- trajectory inference☆105Updated 11 months ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Cell type prioritization in single-cell data☆132Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆114Updated 8 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆40Updated 4 years ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆113Updated 2 months ago
- ☆120Updated 4 months ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆131Updated last year
- ☆127Updated 3 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆85Updated 2 years ago
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆169Updated 3 years ago