limix / CellRegMapLinks
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
☆23Updated last year
Alternatives and similar repositories for CellRegMap
Users that are interested in CellRegMap are comparing it to the libraries listed below
Sorting:
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆37Updated last month
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated this week
- ☆43Updated 4 years ago
- Clone identification from single-cell data☆61Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆56Updated 6 months ago
- ☆26Updated 7 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- ☆29Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 5 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆58Updated 3 years ago
- An R package designed to demultiplex cell hashing data☆31Updated 2 weeks ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆15Updated last year
- R package for Flexible dot plots☆29Updated 3 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Marker gene selection from scRNA-seq data☆15Updated 5 years ago
- ☆15Updated 4 years ago