limix / CellRegMapLinks
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
☆22Updated 11 months ago
Alternatives and similar repositories for CellRegMap
Users that are interested in CellRegMap are comparing it to the libraries listed below
Sorting:
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- ☆41Updated 4 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆53Updated 2 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆53Updated 2 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- ☆24Updated 2 months ago
- Clone identification from single-cell data☆61Updated 2 years ago
- Single-cell Case Control Analysis☆51Updated 9 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated this week
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- ☆29Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆46Updated 6 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆41Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- An R package designed to demultiplex cell hashing data☆31Updated 3 weeks ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- ☆41Updated last month
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆84Updated 11 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequenc…☆31Updated 2 months ago