tudaga / NMFreg_tutorialLinks
A tutorial on NMFreg applied to cerebellum data.
☆12Updated 5 years ago
Alternatives and similar repositories for NMFreg_tutorial
Users that are interested in NMFreg_tutorial are comparing it to the libraries listed below
Sorting:
- Bootstrap imputation for scRNAseq data☆12Updated 5 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Single-cell identity definition using random forest modelling and recursive feature elimination☆12Updated 5 years ago
- ☆11Updated 6 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- ☆14Updated 5 months ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago
- Comparison of single cell normalization strategies☆10Updated 4 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆36Updated 2 months ago
- Fit generalized linear models in python.☆28Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆56Updated 5 months ago
- A python package for learning mutational signatures and their multidimensional genomic properties☆15Updated 5 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- ☆22Updated 5 years ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- ☆38Updated last month
- ☆20Updated 4 years ago
- ☆30Updated last year
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆26Updated last year
- Simulate single-cell RNA-SEQ data using the Splatter statistical framework but implemented in python. In addition, simulate doublet cells…☆27Updated 4 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆59Updated 3 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- ☆22Updated 3 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated last year
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆16Updated 10 years ago
- ☆29Updated 2 years ago
- ☆43Updated last year
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago