Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".
☆14Nov 20, 2020Updated 5 years ago
Alternatives and similar repositories for covid19_MS1
Users that are interested in covid19_MS1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jun 10, 2024Updated last year
- Scripts for using scanpy☆39Oct 20, 2025Updated 5 months ago
- Material for lecture at the EMBL Single Cell Course 2016☆47Apr 7, 2016Updated 10 years ago
- ☆12May 21, 2025Updated 10 months ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Scripts to install as a Bioconda package for making workflows☆18Sep 15, 2024Updated last year
- Performed Exploratory Data Analysis(EDA) on the global COVID-19 dataset. Used Geopython to get a worldwide view of COVID-19 cases.☆13Aug 27, 2020Updated 5 years ago
- Code used to carry out parameter estimation, correlation estimation, type 1 error analysis, and power analysis for our "Pseudoreplication…☆21Sep 9, 2020Updated 5 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆46Jan 8, 2025Updated last year
- Molecular analysis of pre-invasive lung cancer samples☆14Jan 18, 2019Updated 7 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- Coupled clustering of single cell genomic data☆13Sep 21, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆59Aug 17, 2024Updated last year
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- an easy deindex tool for illumina multiple barcodes sequencing☆12Jul 30, 2015Updated 10 years ago
- Toolkit for Single-Cell Velocity☆59Updated this week
- Full annotation using shape-constrained trees☆30Sep 15, 2023Updated 2 years ago
- A fast python class for reading 2-bit files (used by UCSC genome browser)☆14Oct 10, 2025Updated 6 months ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 7 years ago
- https://otexts.com/fpp3/☆19Apr 13, 2021Updated 5 years ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Aug 29, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Website for the 2021-2022 Caltech class Bi/BE/CS 183: Introduction to Computational Biology and Bioinformatics☆10Mar 11, 2022Updated 4 years ago
- ☆22Apr 8, 2026Updated last week
- Git Repository for CPSC 230☆17Nov 17, 2022Updated 3 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- Pytorch implementation of Pocket2Drug: a generative deep learning model to predict binding drugs for ligand-binding sites.☆22May 19, 2022Updated 3 years ago
- Ready for R Site☆11Jan 3, 2024Updated 2 years ago
- ☆33Aug 24, 2021Updated 4 years ago
- Using Git to Code, Collaborate and Share☆14Oct 9, 2024Updated last year
- Javascript library for visualizing genomics data with D3.☆19Jan 6, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Material for a workshop on reproducible science with R and RStudio☆14May 22, 2022Updated 3 years ago
- Essential Software Engineering for Researchers☆10Apr 7, 2026Updated last week
- AlphaFind: Discover structure similarity across the entire known proteome☆26Nov 5, 2025Updated 5 months ago
- Data/analysis repository for "Interrogation of human hematopoiesis..." paper☆20Jul 9, 2019Updated 6 years ago
- ☆23Mar 26, 2022Updated 4 years ago
- ☆47Jan 28, 2026Updated 2 months ago
- ☆15May 7, 2020Updated 5 years ago