glencoesoftware / NGFF-Converter
NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF
☆27Updated 11 months ago
Alternatives and similar repositories for NGFF-Converter
Users that are interested in NGFF-Converter are comparing it to the libraries listed below
Sorting:
- native Python dataclasses for the OME data model☆56Updated last week
- A napari plugin for zarr backed OME-NGFF images☆33Updated last week
- Interface to the Bioformats Java library☆13Updated 3 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated 2 months ago
- A minimal Python package for reading OME-Zarr (meta)data☆25Updated last week
- ☆23Updated this week
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆37Updated last week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Raw format to OME-TIFF converter☆52Updated 2 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated 3 months ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆13Updated last week
- Multiple file format reading directly into napari using pure Python☆36Updated 9 months ago
- Browse your OMERO database from within napari.☆37Updated this week
- Python project containing Ice remoting code for OMERO☆23Updated last month
- Visualizing feature measurements on label images in napari☆10Updated 9 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆44Updated last week
- ☆24Updated last week
- Command-line client for Fractal☆45Updated last week
- GIve easy, high-level access to ome-zarr fileset☆14Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated 2 weeks ago
- NGIO is a Python library to streamline OME-Zarr image analysis workflows.☆13Updated this week
- ☆17Updated last week
- Python libraries for loading, running and packaging bioimage.io models☆31Updated last month
- ☆41Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆26Updated 11 months ago
- ☆16Updated 3 months ago
- Whole slide image registration through wsireg in napari.☆13Updated 2 years ago
- ☆35Updated last week
- An OMERO CLI plugin for creating transfer packets between OMERO servers.☆17Updated last week
- A 3D interactivity toolbox for napari☆34Updated 3 weeks ago