Alternatives and similar repositories for napari-workflow-optimizer

Users that are interested in napari-workflow-optimizer are comparing it to the libraries listed below

• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 5 months ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆28Updated 3 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 4 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• haesleinhuepf / napari-assistant
  ☆28Updated 3 months ago
• haesleinhuepf / natari
  Napari gaming
  ☆17Updated 3 years ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆16Updated 2 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 7 months ago
• BioVisionCenter / ngio
  Ngio is a Python library to streamline OME-Zarr image analysis workflows.
  ☆18Updated 2 weeks ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆16Updated last month
• chanzuckerberg / napari-plugin-alfa-cohort
  Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
  ☆11Updated 4 years ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 3 weeks ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆18Updated 3 months ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆21Updated 3 months ago
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated last month
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated last month
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆23Updated 4 months ago
• Sentinal4D / cellshape
  3D shape analysis using deep learning
  ☆25Updated last year
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• stardist / stardist-napari
  StarDist plugin for napari
  ☆40Updated 11 months ago
• sebi06 / napari_zeiss
  Use Napari Viewer to display CZI images
  ☆11Updated 3 years ago
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• constantinpape / affogato
  Affinity based segmentation algorithms and tools
  ☆10Updated 2 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 3 months ago
• Kapoorlabs-CAPED / NapaTrackMater
  Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.
  ☆17Updated 2 weeks ago
• andy-sweet / napari-metadata
  A napari plugin to view and edit metadata
  ☆10Updated 2 years ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆51Updated 3 months ago
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆11Updated 8 months ago
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 8 months ago
• morphometrics / morphometrics
  ☆22Updated last year