clij / clij2Links
GPU-accelerated image processing for everyone
☆54Updated last year
Alternatives and similar repositories for clij2
Users that are interested in clij2 are comparing it to the libraries listed below
Sorting:
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 7 months ago
- ☆41Updated this week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆95Updated this week
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 4 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆151Updated 2 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 6 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 7 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last week
- Cookiecutter for napari plugins☆71Updated last year
- ☆51Updated 7 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- ☆36Updated last year
- StarDist plugin for napari☆38Updated last year
- High quality visualization for volumetric image data☆53Updated this week
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆156Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated last week
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆86Updated this week
- Browse your OMERO database from within napari.☆39Updated last week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 2 weeks ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated 2 weeks ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆88Updated last week