A napari plugin for zarr backed OME-NGFF images
☆50May 25, 2026Updated this week
Alternatives and similar repositories for napari-ome-zarr
Users that are interested in napari-ome-zarr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An introduction to OME-Zarr for big bioimaging data☆26May 14, 2026Updated 2 weeks ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆241May 18, 2026Updated last week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 6 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆91May 6, 2026Updated 3 weeks ago
- native Python dataclasses for the OME data model☆65Apr 2, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆49May 18, 2026Updated last week
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 8 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆165May 22, 2026Updated last week
- Main tasks for the Fractal analytics platform☆25May 8, 2026Updated 3 weeks ago
- ☆22May 18, 2026Updated last week
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 8 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Updated this week
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- ☆33May 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆118Updated this week
- ☆19Dec 9, 2025Updated 5 months ago
- ☆13Aug 16, 2024Updated last year
- serve Zarr datasets via HTTP☆31Jun 12, 2023Updated 2 years ago
- Fractal backend☆20May 22, 2026Updated last week
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 10 months ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated 10 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Apr 20, 2026Updated last month
- MethodsJ2☆14May 6, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A minimal Zarr image viewer based on Viv.☆194May 19, 2026Updated last week
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 3 years ago
- ITK IO for images stored in OME-Zarr format.☆11Sep 4, 2025Updated 8 months ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20May 18, 2026Updated last week
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆22Aug 6, 2025Updated 9 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆22Nov 24, 2025Updated 6 months ago
- Bio-Formats image file format to raw format converter☆108Apr 22, 2026Updated last month
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆37Mar 3, 2026Updated 2 months ago
- Command-line client for Fractal☆49May 21, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Image reading, metadata management, and image writing for Microscopy images in Python☆125May 1, 2026Updated 3 weeks ago
- A template repo used to make new napari plugins☆37May 1, 2026Updated 3 weeks ago
- ☆44May 22, 2026Updated last week
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- Reference implementation of the Graph Exchange File Format☆39May 20, 2026Updated last week
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 5 months ago
- BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆28May 21, 2026Updated last week