Raw format to OME-TIFF converter
☆57Jul 27, 2026Updated 2 weeks ago
Alternatives and similar repositories for raw2ometiff
Users that are interested in raw2ometiff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bio-Formats image file format to raw format converter☆110Aug 4, 2026Updated last week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆38Jun 25, 2026Updated last month
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- ☆22Updated this week
- ☆23Apr 1, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Minimum Information about Tissue Imaging☆21Oct 18, 2023Updated 2 years ago
- Python tools for creating and manipulating OME-TIFF multi-resolution pyramid images.☆18Aug 8, 2025Updated last year
- Browse your OMERO database from within napari.☆40Aug 1, 2026Updated last week
- Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji☆12May 6, 2025Updated last year
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 4 months ago
- Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.☆356Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 3 months ago
- A minimal Zarr image viewer based on Viv.☆199Jun 22, 2026Updated last month
- Django-based OMERO.web client☆24Aug 3, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Python project containing Ice remoting code for OMERO☆28Jul 30, 2026Updated 2 weeks ago
- ☆16Updated this week
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 8 months ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 8 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆168Updated this week
- Multiple file format reading directly into napari using pure Python☆38Oct 15, 2025Updated 9 months ago
- GIve easy, high-level access to ome-zarr fileset☆24Sep 22, 2025Updated 10 months ago
- Configure Vitessce using existing Scverse plotting APIs☆25Updated this week
- Python API and Jupyter widget for Vitessce☆67Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆71Apr 24, 2026Updated 3 months ago
- An application to display spatial and single-cell experiment data. Built in React, on the Vitessce framework.☆15Nov 3, 2025Updated 9 months ago
- iSyntax to raw format converter☆24Nov 26, 2025Updated 8 months ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆256Updated this week
- A napari plugin for zarr backed OME-NGFF images☆54Updated this week
- OME model (specification, code generator, implementation)☆17Updated this week
- A relabeling tool for tiled segmentation with Dask☆18Sep 24, 2024Updated last year
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆22Mar 12, 2026Updated 5 months ago
- Cookiecutter for napari plugins☆72Nov 6, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 4 years ago
- Lab for quantitative bioimage analysis experiments in Python☆20Feb 16, 2026Updated 5 months ago
- A web-based resource for the scientific visualization community to enhance reproducibility and facilitate testing and development of OME-…☆26Feb 14, 2026Updated 5 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆62Updated this week
- Analyzing cellular niches in spatial transcriptomics data☆38Nov 18, 2024Updated last year
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 6 years ago
- A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.☆39Jul 7, 2026Updated last month