haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
☆20Updated last year
Alternatives and similar repositories for awesome-napari-plugins-that-are-not-on-the-napari-hub-yet:
Users that are interested in awesome-napari-plugins-that-are-not-on-the-napari-hub-yet are comparing it to the libraries listed below
- ☆21Updated 4 months ago
- Visualizing feature measurements on label images in napari☆10Updated 5 months ago
- ilastik plugin for napari☆13Updated 9 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆20Updated this week
- Optimize image processing workflows in napari☆17Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 3 months ago
- Track and lineage visualization with btrack and Napari☆44Updated 2 months ago
- Process images using SimpleITK in napari☆19Updated 3 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆39Updated 2 months ago
- ☆16Updated 2 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆25Updated 2 months ago
- Multiple file format reading directly into napari using pure Python☆34Updated 5 months ago
- Guides and code for 3D nuclear instance segmentation☆20Updated last week
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆12Updated 2 months ago
- ☆15Updated 2 years ago
- ☆29Updated 9 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆53Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆81Updated last week
- ☆17Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated last month
- StarDist plugin for napari☆36Updated 4 months ago
- Whole slide image registration through wsireg in napari.☆12Updated last year
- A 3D interactivity toolbox for napari☆32Updated last month
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆15Updated 3 weeks ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated last month
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆48Updated 2 months ago
- MethodsJ2☆14Updated 2 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 7 months ago