haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yetLinks
☆25Updated 2 years ago
Alternatives and similar repositories for awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
Users that are interested in awesome-napari-plugins-that-are-not-on-the-napari-hub-yet are comparing it to the libraries listed below
Sorting:
- Visualizing feature measurements on label images in napari☆10Updated last year
- ☆22Updated 5 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆24Updated 8 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 4 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- ☆15Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- ilastik plugin for napari☆14Updated 2 weeks ago
- GPU-accelerated Image Processing library for Python☆52Updated last week
- ☆51Updated 7 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- ☆13Updated 2 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- QuPath extension for Cellsparse☆19Updated 7 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 3 months ago
- ☆36Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆18Updated 2 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last month
- ☆15Updated 3 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 5 months ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- A stable diffusion demo for napari☆11Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago