ITK IO for images stored in OME-Zarr format.
☆11Sep 4, 2025Updated 10 months ago
Alternatives and similar repositories for ITKIOOMEZarrNGFF
Users that are interested in ITKIOOMEZarrNGFF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Jul 3, 2026Updated 2 weeks ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆21May 25, 2026Updated last month
- Reading HDF5 files with Zarr☆12Oct 5, 2021Updated 4 years ago
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆47May 11, 2022Updated 4 years ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆56Nov 13, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆37Jun 25, 2026Updated 3 weeks ago
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆16Feb 27, 2026Updated 4 months ago
- Read in Xenium, CosMx, Vizgen, STARmap PLUS, seqFISH data as Spatial or SingleCell Experiment object.☆19Sep 19, 2025Updated 10 months ago
- Prostate gland segmentation with deep Convolutional Neural Networks☆10May 29, 2017Updated 9 years ago
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆133Jul 2, 2026Updated 2 weeks ago
- Slides and Notebooks for scverse 2024☆16Sep 24, 2024Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Jul 3, 2026Updated 2 weeks ago
- An ITK ImageIO module for the OpenSlide library.☆12Apr 23, 2026Updated 2 months ago
- SCIFIO ImageIO plugin for ITK☆16Apr 23, 2026Updated 2 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- An introduction to OME-Zarr for big bioimaging data☆27Jul 1, 2026Updated 2 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆53Jul 13, 2026Updated last week
- SliceTracker is a 3D Slicer extension to support the workflow of MR-guided prostate biopsies.☆13Oct 14, 2020Updated 5 years ago
- serve Zarr datasets via HTTP☆32Jun 12, 2023Updated 3 years ago
- ☆37Updated this week
- Github Action to set up a Developer Command Prompt for Microsoft Visual C++☆40Updated this week
- Zarr filesystem backend for N5☆21Jun 18, 2026Updated last month
- ☆41Jul 24, 2024Updated last year
- Streaming directly to Zarr on the file system or S3☆30Jul 13, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 5 months ago
- ☆13Dec 7, 2021Updated 4 years ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆248Jul 13, 2026Updated last week
- A simple and performant native R reader & writer for Zarr Arrays☆54Updated this week
- Python API and Jupyter widget for Vitessce☆67Jun 10, 2026Updated last month
- ☆33May 2, 2025Updated last year
- This repository provides an interface in MATLAB to read and write Zarr files. Zarr is a file format for scientific data (like HDF5 and ne…☆18Updated this week
- Deployment infrastructure for the Image Data Resource☆14Feb 21, 2026Updated 4 months ago
- 本文根据需求分析,基于Smobiler平台与C#语言开发出了一款“校园电动车管理信息系统”的手机APP。系统使用Visual☆10Mar 30, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for nucleotide conversion sequencing data analysis☆17Jan 13, 2026Updated 6 months ago
- MethodsJ2☆14May 6, 2022Updated 4 years ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated 11 months ago
- A performant scientific image visualization system.☆36Updated this week
- A dataset of pitch curves for music performance assessment☆11Jun 5, 2023Updated 3 years ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆166Updated this week
- Bringing core concepts from anywidget to R☆21Aug 10, 2025Updated 11 months ago