German-BioImaging / omero-rdfLinks
A plugin for exporting RDF from OMERO
☆15Updated last month
Alternatives and similar repositories for omero-rdf
Users that are interested in omero-rdf are comparing it to the libraries listed below
Sorting:
- ☆18Updated 3 weeks ago
- Schema.org Data Models for HTAN☆15Updated 4 months ago
- Create web-based OME-Zarr galleries☆22Updated 2 months ago
- GIve easy, high-level access to ome-zarr fileset☆22Updated 3 months ago
- Python project containing Ice remoting code for OMERO☆27Updated last month
- Streaming directly to Zarr on the file system or S3☆24Updated last month
- An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and ot…☆11Updated 2 months ago
- OME model (specification, code generator, implementation)☆16Updated this week
- BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆24Updated 3 weeks ago
- An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, a…☆15Updated this week
- MethodsJ2☆14Updated 3 years ago
- ☆14Updated this week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Updated last month
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆55Updated this week
- Jupyter Notebooks for the Image Data Resource☆19Updated last month
- Basic example of using OME-Zarr in a Nextflow pipeline☆19Updated 5 months ago
- An OMERO CLI plugin for creating transfer packets between OMERO servers.☆19Updated last month
- An OMERO.web app for creating Figures from images in OMERO☆19Updated this week
- ☆41Updated last week
- litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexibl…☆18Updated 4 months ago
- An OMERO.web app allowing to view images☆21Updated last month
- Experimental micro-service for implementing the Zarr spec over HTTP☆20Updated last month
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated this week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆148Updated 3 weeks ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- Python API and CLI tools for working with WEBKNOSSOS datasets, annotations and server interactions. Includes converter to OME-Zarr.☆27Updated this week
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆37Updated 3 weeks ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last month
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- Bio-Formats image file format to raw format converter☆102Updated 3 weeks ago