napari / cookiecutter-napari-plugin
Cookiecutter for napari plugins
☆69Updated 2 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for cookiecutter-napari-plugin
- A napari plugin for clustering objects according to their properties.☆80Updated this week
- StarDist plugin for napari☆36Updated 2 months ago
- ☆21Updated 2 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆47Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆23Updated this week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- Image reading, metadata management, and image writing for Microscopy images in Python☆53Updated 3 weeks ago
- Command-line client for Fractal☆45Updated this week
- Particle tracking by solving linear assignment problem.☆49Updated 3 weeks ago
- Accurate and efficient spot detection for microscopy data☆61Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆48Updated 3 weeks ago
- A napari plugin for making animations☆79Updated 2 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆39Updated 3 weeks ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆51Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- Cell tracking and segmentation software☆94Updated this week
- ☆17Updated 2 years ago
- Lectures for a napari training course☆50Updated last year
- Pure Python library for reading NIS Elements ND2 images and metadata☆45Updated 8 months ago
- Use ImageJ functionality from napari☆25Updated this week
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last month
- ☆66Updated last week
- native Python dataclasses for the OME data model☆53Updated this week
- ☆20Updated last year
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆31Updated 2 years ago
- ☆43Updated last month
- Multiple file format reading directly into napari using pure Python☆33Updated 4 months ago
- ☆22Updated last month