napari / cookiecutter-napari-pluginView external linksLinks
Cookiecutter for napari plugins
☆71Nov 6, 2024Updated last year
Alternatives and similar repositories for cookiecutter-napari-plugin
Users that are interested in cookiecutter-napari-plugin are comparing it to the libraries listed below
Sorting:
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated last year
- Optimize image processing workflows in napari☆17May 1, 2025Updated 9 months ago
- Python image segmentation plugin☆31Jan 13, 2021Updated 5 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated last month
- Paint segmentations directly to on-disk/remote zarr arrays☆15Jun 26, 2024Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55May 1, 2025Updated 9 months ago
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 3 months ago
- ☆33May 2, 2025Updated 9 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Jul 18, 2025Updated 6 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 9 months ago
- ☆14Jan 25, 2024Updated 2 years ago
- Discover, install, and share napari plugins☆54Updated this week
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- ☆41Updated this week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated last week
- Linking napari layers with Matplotlib plots☆43Feb 2, 2026Updated last week
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆105Updated this week
- ☆38Dec 5, 2025Updated 2 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆112Dec 22, 2025Updated last month
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- A napari plugin for clustering objects according to their properties.☆90Jan 26, 2026Updated 2 weeks ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Nov 16, 2025Updated 2 months ago
- Use ImageJ functionality from napari☆33Jan 2, 2026Updated last month
- ☆15Jul 29, 2022Updated 3 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆18Nov 18, 2025Updated 2 months ago
- ☆25May 16, 2023Updated 2 years ago
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- A napari plugin to view and edit metadata☆13Feb 1, 2026Updated last week
- Template for creating a new python repository☆13Sep 28, 2025Updated 4 months ago
- StarDist plugin for napari☆38Aug 24, 2024Updated last year
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Oct 27, 2024Updated last year
- Dataset EXploration & Processing☆33May 11, 2023Updated 2 years ago
- build GUIs from type annotations☆502Feb 2, 2026Updated last week
- Basic example of using OME-Zarr in a Nextflow pipeline☆20Jul 15, 2025Updated 6 months ago
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Jan 28, 2026Updated 2 weeks ago