Spotiflow plugin for napari
☆19May 19, 2026Updated 4 months ago
Alternatives and similar repositories for napari-spotiflow
Users that are interested in napari-spotiflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Accurate and efficient spot detection for microscopy data☆144Jun 8, 2026Updated 4 months ago
- Automated batch processing of cell and tissue microscopy image data in Napari☆23Oct 1, 2026Updated 2 weeks ago
- dask empowered fast4dreg☆17Mar 11, 2026Updated 7 months ago
- Segment images utilizing pre-trained neural networks as feature extractors☆55Jul 3, 2026Updated 3 months ago
- ☆12Mar 18, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆40Oct 1, 2026Updated 2 weeks ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 3 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 10 months ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆38Oct 8, 2026Updated last week
- Accelerated CellStitch for 3D labeling of anisotropic image stacks☆15Mar 1, 2026Updated 7 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆49May 1, 2025Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆67Oct 27, 2024Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 10 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆15Apr 1, 2026Updated 6 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆32May 1, 2025Updated last year
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- Cell tracking and segmentation software☆210Oct 9, 2026Updated last week
- Python utility and library for converting Nikon .nd2 files to pyramidal OME TIFF.☆13May 13, 2022Updated 4 years ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆132Sep 30, 2026Updated 2 weeks ago
- RRID:SCR_027562☆10Updated this week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Feb 17, 2025Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 10 months ago
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 3 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆25Oct 5, 2026Updated last week
- Deep-learning library for image restoration.☆154Updated this week
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 4 months ago
- A fully scalable robust image feature extraction library.☆30Oct 8, 2026Updated last week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆26Nov 25, 2025Updated 10 months ago
- InstanSeg is a pytorch-based cell and nucleus segmentation pipeline for fluorescence and brightfield microscopy images.☆247Sep 29, 2026Updated 2 weeks ago
- GPU-accelerated general purpose image processing and image analysis in napari☆37May 1, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- StarDist plugin for napari☆42Aug 24, 2024Updated 2 years ago
- A 3D interactivity toolbox for napari☆38Jul 8, 2025Updated last year
- ☆18Sep 30, 2026Updated 2 weeks ago
- A napari plugin to view and edit layer metadata☆14Oct 6, 2026Updated last week
- A relabeling tool for tiled segmentation with Dask☆18Sep 24, 2024Updated 2 years ago
- ☆25Oct 22, 2024Updated last year
- Interacting Active Surfaces☆10Jul 12, 2022Updated 4 years ago