haesleinhuepf / napari-accelerated-pixel-and-object-classificationLinks
GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
☆45Updated 7 months ago
Alternatives and similar repositories for napari-accelerated-pixel-and-object-classification
Users that are interested in napari-accelerated-pixel-and-object-classification are comparing it to the libraries listed below
Sorting:
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 5 months ago
- ☆22Updated 6 months ago
- StarDist plugin for napari☆38Updated last year
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated 2 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 3 weeks ago
- ☆51Updated 7 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 7 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 7 months ago
- ☆25Updated 2 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆99Updated this week
- Python libraries for loading, running and packaging bioimage.io models☆34Updated this week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- A template repo used to make new napari plugins☆30Updated 3 weeks ago
- Multiple file format reading directly into napari using pure Python☆39Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- GPU-accelerated Image Processing library for Python☆52Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- Visualizing feature measurements on label images in napari☆10Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated last month
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last month
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- dask empowered fast4dreg☆15Updated last year
- Guides and code for 3D nuclear instance segmentation☆22Updated 3 weeks ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- python tools for BigDataViewer☆22Updated 11 months ago
- ☆33Updated 7 months ago