Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
☆155Mar 16, 2026Updated this week
Alternatives and similar repositories for ngff
Users that are interested in ngff are comparing it to the libraries listed below
Sorting:
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆226Mar 11, 2026Updated last week
- A napari plugin for zarr backed OME-NGFF images☆45Updated this week
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 6 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 4 months ago
- native Python dataclasses for the OME data model☆65Feb 12, 2026Updated last month
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆37Updated this week
- A minimal Zarr image viewer based on Viv.☆186Updated this week
- Python API and Jupyter widget for Vitessce☆62Feb 12, 2026Updated last month
- Tools for distributed alignment of massive images☆94Mar 9, 2026Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆28Mar 14, 2025Updated last year
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆67Updated this week
- Image reading, metadata management, and image writing for Microscopy images in Python☆117Mar 13, 2026Updated last week
- Main tasks for the Fractal analytics platform☆23Updated this week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Mar 3, 2026Updated 2 weeks ago
- Bio-Formats image file format to raw format converter☆103Updated this week
- Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.☆338Mar 9, 2026Updated last week
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆47Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data