GIve easy, high-level access to ome-zarr fileset
☆24Sep 22, 2025Updated last year
Alternatives and similar repositories for ez_zarr
Users that are interested in ez_zarr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆52Updated this week
- ☆22Oct 5, 2026Updated last week
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Oct 5, 2026Updated last week
- ☆13Aug 16, 2024Updated 2 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An introduction to OME-Zarr for big bioimaging data☆28Oct 1, 2026Updated last week
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆58Nov 13, 2025Updated 10 months ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆40Oct 1, 2026Updated last week
- A napari plugin for zarr backed OME-NGFF images☆56Updated this week
- ilastik plugin for napari☆15Mar 2, 2026Updated 7 months ago
- A 3D interactivity toolbox for napari☆38Jul 8, 2025Updated last year
- Command-line client for Fractal☆49Oct 5, 2026Updated last week
- Create web-based OME-Zarr galleries☆31Jul 7, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python project containing Ice remoting code for OMERO☆28Sep 22, 2026Updated 2 weeks ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆262Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 months ago
- OME model (specification, code generator, implementation)☆18Aug 7, 2026Updated 2 months ago
- A plugin for exporting RDF from OMERO☆16Feb 27, 2026Updated 7 months ago
- Optimize image processing workflows in napari☆17May 1, 2025Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Updated this week
- Modern Bio-Formats wrapper with clean lazy Python API☆24Jun 25, 2026Updated 3 months ago
- ☆40Mar 22, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆135Sep 6, 2026Updated last month
- ☆15Updated this week
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆73Updated this week
- BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆29Sep 24, 2026Updated 2 weeks ago
- Main tasks for the Fractal analytics platform☆28Updated this week
- Django-based OMERO.web client☆24Oct 5, 2026Updated last week
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 4 months ago
- ☆14May 17, 2024Updated 2 years ago
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 6 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Web Image Processing Pipeline (WIPP)☆27Dec 19, 2025Updated 9 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆132Sep 30, 2026Updated last week
- serve Zarr datasets via HTTP☆32Jun 12, 2023Updated 3 years ago
- A dataset for loading zarr files to be used in machine learning training pipelines☆37Jan 5, 2026Updated 9 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆25Oct 5, 2026Updated last week
- Napari plugin for vollseg☆14Jul 16, 2025Updated last year
- A python package for fitting splines.☆24Oct 6, 2026Updated last week