glarue / reciprologsLinks
Find reciprocal best hits (DIAMOND or BLAST) between two (or more!) sets of sequences.
☆13Updated last year
Alternatives and similar repositories for reciprologs
Users that are interested in reciprologs are comparing it to the libraries listed below
Sorting:
- GENE-SWitCH project RNA-Seq analysis pipeline☆26Updated 4 months ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 3 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆67Updated last week
- Error correction of ONT transcript reads☆58Updated last year
- BITACORA: A Bioinformatics tool for gene family annotation☆45Updated 3 weeks ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- perSVade: personalized Structural Variation detection☆39Updated 4 months ago
- A pipeline for isoseq☆23Updated 7 years ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 6 months ago
- Snakemake pipeline to analyze transposable element 'omics data.☆23Updated this week
- A battery of methylation tools for PacBio HiFi reads☆36Updated 3 weeks ago
- Yet another Hi-C scaffolding tool☆20Updated 8 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Updated 3 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- ☆32Updated 4 years ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆34Updated 6 years ago
- ☆21Updated 5 years ago
- A Nextflow pipeline for evaluating assembly quality☆34Updated this week
- Computational Analysis of Gene Expression Evolution☆42Updated last week
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated 2 weeks ago
- ☆28Updated 2 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 3 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆34Updated 7 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 3 months ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 2 months ago
- Integrate multiple genome assemblies into a pangenome graph☆34Updated 3 years ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆16Updated last year