gao-lab / LOST_and_FOUNDView external linksLinks
☆13Apr 7, 2023Updated 2 years ago
Alternatives and similar repositories for LOST_and_FOUND
Users that are interested in LOST_and_FOUND are comparing it to the libraries listed below
Sorting:
- ☆16Nov 25, 2019Updated 6 years ago
- Annotate Olfactory receptor CDS from genome☆10Apr 29, 2023Updated 2 years ago
- Renames headers in FASTA file☆12Jun 28, 2017Updated 8 years ago
- Scripts that used in our chicken T2T manuscript.☆22Jan 14, 2026Updated last month
- Code for TAD_SV project☆11Mar 16, 2022Updated 3 years ago
- ☆12Mar 3, 2023Updated 2 years ago
- The complete sequence of a Chinese individual☆11Oct 8, 2024Updated last year
- Calculate the dn/ds (also pn and ps) value of cds☆13Jul 11, 2020Updated 5 years ago
- Daily usage script recording☆12Jan 17, 2026Updated 3 weeks ago
- Genome alignment and synteny plots☆33Jun 5, 2023Updated 2 years ago
- Analyzing Hi-C data in R with HiCExperiment objects☆15Mar 18, 2025Updated 10 months ago
- ☆10Dec 11, 2024Updated last year
- ☆11Sep 28, 2021Updated 4 years ago
- Figures for the CHM13 T2T SD paper.☆10Sep 12, 2021Updated 4 years ago
- Chromosome-level synteny plotting using orthologous regions☆31Sep 19, 2024Updated last year
- ☆15Aug 6, 2025Updated 6 months ago
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- Quartet-based species tree and tree of blob estimation☆14Updated this week
- Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.☆13Feb 28, 2022Updated 3 years ago
- General analysis of HiC data, including compartment A/B, domains and loops.☆14Feb 17, 2023Updated 2 years ago
- Portable solution to generate genome alignment chains using lastz☆60Dec 20, 2025Updated last month
- Some useful bioinformatics pipelines for genomics analysis☆14May 25, 2021Updated 4 years ago
- ☆16Jul 29, 2023Updated 2 years ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Jan 17, 2024Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- Find reciprocal best hits (DIAMOND or BLAST) between two (or more!) sets of sequences.☆13Jun 6, 2024Updated last year
- Analyses of sex chromosome evolution in songbirds☆16Jun 15, 2019Updated 6 years ago
- parallelLastz: Running Lastz in parallel☆17Sep 13, 2024Updated last year
- a Sequencing Quality Assessment Tool☆17Jul 28, 2022Updated 3 years ago
- Segmental duplication detection tool☆16Feb 7, 2023Updated 3 years ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 3 years ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 7 months ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Jul 12, 2020Updated 5 years ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆35Sep 11, 2024Updated last year
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 7 years ago
- ☆23Jun 27, 2023Updated 2 years ago
- A machine learning-based genotyping tool for structural variation in short reads☆25Sep 15, 2025Updated 5 months ago
- FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing☆45Dec 21, 2021Updated 4 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago