Simple script to generate whole-genome coverage plots
☆19Jun 23, 2015Updated 10 years ago
Alternatives and similar repositories for genome_coverage_plotter
Users that are interested in genome_coverage_plotter are comparing it to the libraries listed below
Sorting:
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆15Sep 17, 2025Updated 6 months ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Feb 28, 2023Updated 3 years ago
- Tao Yan's Plot Toolkit☆12Aug 20, 2019Updated 6 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- ☆16Jan 10, 2022Updated 4 years ago
- ☆51Jun 25, 2024Updated last year
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated 10 months ago
- A tool for evaluate long-read de novo assembly results☆48Aug 28, 2024Updated last year
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- Liftover VCF files☆19Dec 10, 2016Updated 9 years ago
- Calculate the dn/ds (also pn and ps) value of cds☆13Jul 11, 2020Updated 5 years ago
- HiFi error modeler and simulator with ploidy☆11Feb 12, 2026Updated last month
- ☆15Aug 22, 2023Updated 2 years ago
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 6 years ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- A repository of notes, code, slides, and resources for the MetaPathways tutorial being held February 2014 at UBC.☆18Mar 9, 2015Updated 11 years ago
- ☆26Oct 17, 2018Updated 7 years ago
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- Multiple Genome Viewer☆12Sep 16, 2025Updated 6 months ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- Extracting paths from assembly graphs☆24Apr 26, 2024Updated last year
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 5 years ago
- Specific Transposable Element Aligner (HERV-K)☆16Sep 12, 2019Updated 6 years ago
- One stop MIP design and analysis☆24Sep 30, 2020Updated 5 years ago
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 4 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Dec 28, 2022Updated 3 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.☆19Aug 1, 2023Updated 2 years ago
- ☆11Apr 11, 2019Updated 6 years ago
- NiPTUNE. A Python library for NIPT analyses.☆12Nov 22, 2021Updated 4 years ago
- Robust Eukaryotic Annotation Toolkit☆17Feb 28, 2025Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jan 28, 2026Updated last month
- A SARS-CoV-2 Mutation Pattern Query Tool☆17Mar 21, 2023Updated 3 years ago
- NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm☆28May 9, 2024Updated last year
- An R package for Standardized Summary, Annotation, Comparison, and Visualization of CNV, CNVR and ROH☆15Oct 17, 2021Updated 4 years ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- a hidden Markov model to infer simple repeats from genome sequences☆37Feb 19, 2021Updated 5 years ago