Assemble and following pipeline used in wisent genome paper.
☆17Dec 23, 2016Updated 9 years ago
Alternatives and similar repositories for assemble_pipeline
Users that are interested in assemble_pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Useful bioinformatic scripts☆60Feb 23, 2026Updated 3 months ago
- ☆13Apr 30, 2019Updated 7 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 5 months ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Mar 26, 2022Updated 4 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- ☆16May 7, 2023Updated 3 years ago
- Source code from Zhang et al., (2014) Genomic data of avian phylogenomics project. GigaScience 3:26☆37Dec 21, 2023Updated 2 years ago
- ☆15Nov 11, 2019Updated 6 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆27Jan 18, 2023Updated 3 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Mar 5, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The cattle Genotype-Tissue Expression atlas v1☆29Mar 14, 2023Updated 3 years ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- Find reciprocal best hits (DIAMOND or BLAST) between two (or more!) sets of sequences.☆14Jun 6, 2024Updated 2 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆11Oct 15, 2023Updated 2 years ago
- 生物信息学入门的系列课程，包括Linux, shell, Python 编程，建库测序，基因组学，以及系统进化，常用软件使用等内容。☆23Sep 16, 2021Updated 4 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- Scripts of population genomics analysis☆36May 8, 2018Updated 8 years ago
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Some useful gadgets☆12Mar 14, 2022Updated 4 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Mar 17, 2025Updated last year
- Scripts for population genetics analysis☆21Nov 10, 2022Updated 3 years ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Mar 12, 2026Updated 3 months ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 11 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- ☆25Nov 29, 2022Updated 3 years ago
- ☆12Feb 16, 2026Updated 4 months ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆79May 20, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆11May 16, 2021Updated 5 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆95Sep 8, 2016Updated 9 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago