MGKit: Metagenomics Framework
☆14Oct 31, 2022Updated 4 years ago
Alternatives and similar repositories for mgkit
Users that are interested in mgkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A versatile framework for single-cell transcriptomic data analysis in plants.☆24Mar 11, 2024Updated 2 years ago
- Software mention extraction and linking from scientific articles☆14Sep 2, 2022Updated 4 years ago
- ☆11Oct 23, 2024Updated 2 years ago
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 4 years ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆19Sep 1, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Transcript assembly and quantification for RNA-Seq☆12Jun 3, 2019Updated 7 years ago
- Tutorials and schedule for EDAMAME 2018☆11Jun 29, 2018Updated 8 years ago
- ☆10Updated this week
- GO KEGG annotation☆42Oct 19, 2022Updated 4 years ago
- A pipeline to de novo assemble the stLFR reads using Supernova Assembler☆20Feb 22, 2023Updated 3 years ago
- ☆11Oct 31, 2026Updated last week
- QDrant-NLP☆12Aug 30, 2022Updated 4 years ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆63Oct 27, 2023Updated 3 years ago
- Aggregate genome coverage☆13Oct 22, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Oct 23, 2026Updated 2 weeks ago
- ☆12Sep 7, 2019Updated 7 years ago
- PEnG-motif is an open-source software package for searching statistically overrepresented motifs (position specific weight matrices, PWMs…☆10Nov 27, 2019Updated 6 years ago
- ☆17Mar 3, 2023Updated 3 years ago
- Open database of scholarly journals☆11Oct 26, 2022Updated 4 years ago
- Automatized Polygenic Score Prediction☆10Sep 21, 2026Updated last month
- ☆16May 7, 2023Updated 3 years ago
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 3 years ago
- Interactive visualization of assembly graphs☆83Apr 2, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Apr 10, 2015Updated 11 years ago
- Extensible quality control dashboard built around FASTQ assessment.☆15May 17, 2019Updated 7 years ago
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 4 years ago
- genome annotation (RNAseq and TE) pipeline (draft)☆14Oct 28, 2026Updated last week
- A Snakemake executor plugin for submitting jobs to a LSF cluster☆13Aug 27, 2026Updated 2 months ago
- ☆13Aug 20, 2025Updated last year
- The Light Program Interface☆12Feb 1, 2018Updated 8 years ago
- Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern☆10Jan 25, 2022Updated 4 years ago
- Prefix-renaming FASTA records really fast.☆18Jun 26, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Similarity search in heterogeneous knowledge graphs using meta paths.☆31Mar 11, 2023Updated 3 years ago
- ☆14Jan 8, 2020Updated 6 years ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 11 years ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 7 years ago
- Biological Data Science Workshops☆10Apr 22, 2022Updated 4 years ago
- POC Nextflow pipeline to run Illumina DRAGEN software☆14Aug 15, 2025Updated last year
- MultiQC plugin replicating the most used plots and tables from Illumina's SAV☆11Aug 31, 2026Updated 2 months ago