signalbash / borfLinks
ORF prediction using python
☆11Updated 3 years ago
Alternatives and similar repositories for borf
Users that are interested in borf are comparing it to the libraries listed below
Sorting:
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- ☆28Updated 2 years ago
- Find Unique genomic Regions☆30Updated last week
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆29Updated 10 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 3 years ago
- ☆28Updated 3 years ago
- cgat-apps repository☆34Updated 3 months ago
- Consensus genome annotation using OMA☆26Updated last month
- CDS prediction in transcripts☆23Updated 5 months ago
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆23Updated 2 months ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆61Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated 2 years ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- ☆16Updated last month
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Updated 4 months ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 7 months ago
- TreeBeST: Tree Building guided by Species Tree☆14Updated 14 years ago
- Robust Eukaryotic Annotation Toolkit☆18Updated 5 months ago
- Generate unique KMERs for every contig in a FASTA file☆48Updated 2 years ago
- Command line tool to plot genomic coverage from a BAM file☆14Updated 2 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆11Updated 7 years ago