slimsuite / buscomp
BUSCOMP: BUSCO Compiler and Comparison tool
☆21Updated 6 months ago
Alternatives and similar repositories for buscomp:
Users that are interested in buscomp are comparing it to the libraries listed below
- Multi-genome synteny block visualization tool☆32Updated 2 months ago
- Automatic evaluation of HGTs☆27Updated last month
- Diploid genome assembly analysis tools☆14Updated 6 months ago
- Domain based annotation of transposable elements☆19Updated last month
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 4 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- Dinoflagellate Annotation Workflow☆14Updated 2 years ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated 6 months ago
- Genome alignment and synteny plots☆29Updated last year
- ContScout sequence contamination filter tool☆20Updated 2 months ago
- Add multiple thread function for genome comparison☆15Updated 3 years ago
- A nextflow pipeline for polishing CLR assemblies☆17Updated 2 years ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆16Updated 4 years ago
- Yet another Hi-C scaffolding tool☆20Updated 5 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- Toolkit for evolutionary analyses of linkage groups☆27Updated 8 months ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated 3 weeks ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆28Updated 2 months ago
- ☆32Updated 4 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆12Updated 2 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated 9 months ago
- An R package to infer and analyze synteny networks from protein sequences☆28Updated 3 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Updated 5 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- ☆22Updated 7 months ago
- ☆27Updated last year
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆14Updated 3 years ago
- MCMCtree tutorials☆22Updated 9 months ago