slimsuite / buscomp
BUSCOMP: BUSCO Compiler and Comparison tool
☆21Updated 2 months ago
Related projects ⓘ
Alternatives and complementary repositories for buscomp
- Automatic evaluation of HGTs☆25Updated 2 months ago
- Genome alignment and synteny plots☆27Updated last year
- Domain based annotation of transposable elements☆19Updated last month
- Chromosome-level synteny plotting using orthologous regions☆28Updated 2 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆34Updated last year
- ☆32Updated 3 years ago
- Diploid genome assembly analysis tools☆13Updated 2 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆23Updated 2 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆12Updated 4 years ago
- R package to draw syntenic plots in 3 different styles☆39Updated 11 months ago
- Dinoflagellate Annotation Workflow☆12Updated 2 years ago
- ContScout sequence contamination filter tool☆16Updated last month
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆17Updated 4 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆24Updated 5 months ago
- Genome assembly soft-masking using Red (REpeat Detector)☆12Updated 5 years ago
- ☆24Updated 10 months ago
- R package for comparison of synteny conservation at the genome-wide scale.☆13Updated 5 months ago
- Genome Annotation Pipeline☆32Updated 3 months ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆11Updated last year
- Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye☆26Updated 6 months ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated 3 weeks ago
- Add multiple thread function for genome comparison☆15Updated 3 years ago
- ☆29Updated 2 weeks ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆15Updated 4 years ago
- Convergent substitution detection tool based on the PCOC model☆29Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆23Updated 4 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- A genome assembly assessment pipeline.☆36Updated last year
- ☆19Updated 3 months ago
- Yet another Hi-C scaffolding tool☆19Updated last month