slimsuite / buscompLinks
BUSCOMP: BUSCO Compiler and Comparison tool
☆21Updated last year
Alternatives and similar repositories for buscomp
Users that are interested in buscomp are comparing it to the libraries listed below
Sorting:
- Genome alignment and synteny plots☆33Updated 2 years ago
- A nextflow pipeline for polishing CLR assemblies☆18Updated 2 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆27Updated 4 months ago
- Domain based annotation of transposable elements☆21Updated 3 months ago
- Consensus genome annotation using OMA☆31Updated last week
- Diploid genome assembly analysis tools☆14Updated last year
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆19Updated last week
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 10 months ago
- Chromosome-level synteny plotting using orthologous regions☆31Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- scripts to parse and analyse MCScanX collinearity output☆33Updated 5 years ago
- Multi-genome synteny block visualization tool☆52Updated 2 weeks ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆26Updated last year
- An R package to infer and analyze synteny networks from protein sequences☆36Updated 6 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆12Updated 2 months ago
- ☆26Updated 2 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Updated 5 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Updated 9 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- ☆30Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆30Updated 4 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆37Updated last week
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆11Updated 2 years ago
- A reliable gap filling pipeline for draft genomes☆11Updated 6 years ago
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆20Updated last week
- Add multiple thread function for genome comparison☆16Updated 4 years ago