slimsuite / buscompLinks
BUSCOMP: BUSCO Compiler and Comparison tool
☆21Updated last year
Alternatives and similar repositories for buscomp
Users that are interested in buscomp are comparing it to the libraries listed below
Sorting:
- A nextflow pipeline for polishing CLR assemblies☆17Updated 2 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 7 months ago
- Genome alignment and synteny plots☆32Updated 2 years ago
- Domain based annotation of transposable elements☆20Updated this week
- ☆28Updated last year
- Diploid genome assembly analysis tools☆14Updated last year
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆13Updated 2 years ago
- Yet another Hi-C scaffolding tool☆22Updated 11 months ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆23Updated last year
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆19Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- FastK based version of Merqury☆28Updated 2 weeks ago
- An R package to infer and analyze synteny networks from protein sequences☆32Updated 2 months ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated last year
- Consensus genome annotation using OMA☆27Updated 3 months ago
- ☆15Updated last year
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 3 weeks ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 10 months ago
- A reliable gap filling pipeline for draft genomes☆11Updated 6 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Updated 6 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆37Updated 2 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆31Updated last month
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 5 months ago
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated last month
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago