Rowena-h / BUSCOfilterLinks
A tool to filter BUSCO output into single-copy gene files for phylogenomics
☆13Updated 11 months ago
Alternatives and similar repositories for BUSCOfilter
Users that are interested in BUSCOfilter are comparing it to the libraries listed below
Sorting:
- Multi-genome synteny block visualization tool☆42Updated 5 months ago
- ContScout sequence contamination filter tool☆20Updated last month
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 6 months ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated 7 months ago
- Automatic evaluation of HGTs☆30Updated 5 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 5 months ago
- ☆25Updated 10 months ago
- Genome alignment and synteny plots☆30Updated 2 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆23Updated this week
- Tool for fully-automated inference of species trees from raw genome assemblies☆38Updated last month
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆19Updated last year
- ☆22Updated 11 years ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated 9 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆33Updated 3 months ago
- Genome-Genome circle synteny☆25Updated last year
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- Chromosome-level synteny plotting using orthologous regions☆29Updated 9 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Diploid genome assembly analysis tools☆14Updated 9 months ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆11Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 3 months ago
- Computational Analysis of Gene Expression Evolution☆43Updated last week
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆12Updated 2 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 5 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 4 months ago
- ☆32Updated 4 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆34Updated last year