ORFFinder in Python
☆14Aug 24, 2024Updated last year
Alternatives and similar repositories for ORFFinder
Users that are interested in ORFFinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)☆14Dec 7, 2016Updated 9 years ago
- Fast and flexible ORF finder☆82Jan 17, 2022Updated 4 years ago
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 6 years ago
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated last month
- Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)☆12Aug 6, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles☆12Dec 16, 2022Updated 3 years ago
- Automatically exported from code.google.com/p/qsimscan☆14Oct 10, 2021Updated 4 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- ☆13Jul 13, 2026Updated last month
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆15Aug 6, 2026Updated last week
- ☆11Sep 16, 2021Updated 4 years ago
- Fastq compression tool☆17Dec 2, 2019Updated 6 years ago
- ☆32Nov 25, 2019Updated 6 years ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆28Jul 26, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Aug 11, 2026Updated last week
- ☆28Aug 6, 2026Updated last week
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆14Nov 23, 2024Updated last year
- A set of packages to read and write common file formats produced by computational biology software.☆10Jan 21, 2014Updated 12 years ago
- MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded …☆10May 12, 2026Updated 3 months ago
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated 2 years ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- MicrobeRX☆17Aug 11, 2025Updated last year
- Snakemake workflow to detect and classify viruses in metagenome assemblies.☆19Feb 14, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Extensible quality control dashboard built around FASTQ assessment.☆15May 17, 2019Updated 7 years ago
- Prefix-renaming FASTA records really fast.☆18Jun 26, 2024Updated 2 years ago
- ☆17Mar 3, 2023Updated 3 years ago
- TFFM framework☆13Sep 22, 2025Updated 10 months ago
- RNA-Seq normalization and quantification pipeline☆12Nov 25, 2024Updated last year
- simple and not slow ORF caller☆24Apr 7, 2026Updated 4 months ago
- A toolkit for quality control & adjustment of nucleotide redundancy in bacterial pan-genome analyses☆21Feb 12, 2026Updated 6 months ago
- Quantification of transposable element expression using RNA-seq☆92Feb 8, 2024Updated 2 years ago
- Debian packages for Polybar☆13Apr 16, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Transposable Element Finder - Detection of active transposable elements from NGS data☆10Apr 14, 2026Updated 4 months ago
- IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.☆28Oct 6, 2023Updated 2 years ago
- Tool comparison for detecting differentially expressed individual transposable elements☆12Jan 7, 2022Updated 4 years ago
- ☆35Oct 6, 2025Updated 10 months ago
- MGKit: Metagenomics Framework☆15Oct 31, 2022Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆40Sep 22, 2025Updated 10 months ago
- Tool for visualising assemblies.☆17Sep 15, 2015Updated 10 years ago