AliTVTeam / AliTV-perl-interfaceLinks
☆11Updated 4 years ago
Alternatives and similar repositories for AliTV-perl-interface
Users that are interested in AliTV-perl-interface are comparing it to the libraries listed below
Sorting:
- ☆19Updated last year
- ☆20Updated 2 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Updated 9 years ago
- Read contamination removal☆25Updated last year
- transposable element typing pipeline☆19Updated last year
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 8 months ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Updated 2 years ago
- Long read QC, assembly and scaffolding pipeline☆13Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Updated last year
- Identifying repeats in high-throughput sequencing data☆16Updated last year
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Updated 2 months ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Updated 4 years ago
- Reference genome quality scores☆21Updated 5 years ago
- ☆15Updated 5 years ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆22Updated last year
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Updated last year
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆22Updated last month
- A comparative genome scaffolding tool☆16Updated 7 years ago
- Demographic inference from whole genomes☆13Updated 3 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 3 months ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 4 months ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 5 years ago
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights☆16Updated last month
- PanGenomePipeline☆16Updated last year
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Updated 5 months ago
- Validate and edit small eukaryotic genome assemblies☆33Updated 2 years ago