AliTVTeam / AliTV-perl-interface
☆10Updated 3 years ago
Alternatives and similar repositories for AliTV-perl-interface:
Users that are interested in AliTV-perl-interface are comparing it to the libraries listed below
- ☆19Updated 8 months ago
- transposable element typing pipeline☆17Updated 11 months ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆18Updated last year
- ☆10Updated 4 years ago
- HyPhy tutorials☆10Updated 6 years ago
- De novo VIral Genome Annotator☆21Updated 5 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- ☆10Updated 11 months ago
- The MafFilter genome alignment processor☆17Updated 5 months ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 6 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Updated 5 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆14Updated 2 years ago
- ☆15Updated 4 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆21Updated 2 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆17Updated 2 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated 9 months ago
- Lowest Common Ancestor from a SAM/BAM/CRAM alignment file☆9Updated 5 months ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 4 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆36Updated 3 months ago
- ☆19Updated last year
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 6 years ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆17Updated 3 weeks ago
- ☆12Updated 5 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆17Updated 3 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆31Updated 2 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated 2 years ago
- Variant call verification☆16Updated last month
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 2 years ago