meiyang12 / Genome-annotation-pipelineLinks
Genome annotation pipeline
☆63Updated last year
Alternatives and similar repositories for Genome-annotation-pipeline
Users that are interested in Genome-annotation-pipeline are comparing it to the libraries listed below
Sorting:
- DNA序列比对结果 可视化展示工具☆56Updated 2 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆62Updated this week
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆33Updated last month
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆43Updated 2 weeks ago
- ☆82Updated last year
- A novel genome assembly pipeline based on deep learning☆65Updated 10 months ago
- Neural network classification of TE☆96Updated 2 weeks ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- tomato graph pangenome☆84Updated 2 years ago
- A parallel wrapper for LTR_FINDER☆55Updated 7 months ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 6 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆102Updated 2 weeks ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆50Updated 2 months ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆41Updated last month
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆83Updated 4 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 5 months ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆33Updated 2 years ago
- This is the standalone version of the EviAnn pipeline☆127Updated this week
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Useful bioinformatic scripts☆58Updated 11 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 4 months ago
- An efficient assembly tool for plant mitochondrial genome☆64Updated last year
- ☆38Updated 3 months ago
- Genomic related tools☆71Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆27Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated last month
- ☆81Updated 2 weeks ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated last week