meiyang12 / Genome-annotation-pipeline
Genome annotation pipeline
☆58Updated 10 months ago
Alternatives and similar repositories for Genome-annotation-pipeline:
Users that are interested in Genome-annotation-pipeline are comparing it to the libraries listed below
- DNA序列比对结果 可视化展示工具☆49Updated 2 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆52Updated 10 months ago
- A novel genome assembly pipeline based on deep learning☆62Updated 5 months ago
- ☆78Updated 9 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆89Updated 5 months ago
- NLR-Annotator upload☆65Updated last year
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆50Updated 5 years ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆29Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆32Updated last week
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆61Updated 5 years ago
- Genomic related tools☆70Updated 3 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆66Updated 3 years ago
- Plastid Genome Annotator☆49Updated 4 years ago
- Useful bioinformatic scripts☆56Updated 5 months ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆28Updated 4 months ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆33Updated 4 years ago
- Construct ab initio gene prediction using only BUSCO augustus models. Add in transcriptome for extra support☆21Updated last year
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆38Updated 5 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆43Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 7 months ago
- ☆26Updated last month
- A pipeline used to identify different modes of duplicated gene pairs☆99Updated last month
- An efficient assembly tool for plant mitochondrial genome☆62Updated 11 months ago
- ☆15Updated 3 years ago
- A parallel wrapper for LTR_FINDER☆50Updated last month
- TransposonUltimate - a holistic set of tools for transposon identification☆83Updated 3 years ago
- Package to Draw NLR Domain Architecture using NLRtracker Output☆12Updated 3 years ago