shuliliu / cattleGTExLinks
The cattle Genotype-Tissue Expression atlas v1
☆27Updated 2 years ago
Alternatives and similar repositories for cattleGTEx
Users that are interested in cattleGTEx are comparing it to the libraries listed below
Sorting:
- ☆27Updated 3 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated last year
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆31Updated 10 months ago
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆25Updated 11 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆19Updated last year
- ☆14Updated 7 years ago
- Cross-population fine-mapping☆37Updated 10 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 6 months ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆16Updated last month
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆34Updated 3 months ago
- ☆20Updated 3 years ago
- ☆23Updated 2 years ago
- ☆18Updated last year
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆20Updated 3 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- ☆15Updated 3 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- Structural variant merging tool☆55Updated last year
- ☆10Updated 4 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 4 months ago
- ☆23Updated last year
- ☆22Updated 6 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆13Updated 11 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated 2 years ago