Alternatives and similar repositories for cattleGTEx:

Users that are interested in cattleGTEx are comparing it to the libraries listed below

• kcakdemir / HiCPlotter
  “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
  ☆19Updated 4 years ago
• Wendellab / CisTransRegulation
  Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum
  ☆16Updated last year
• yiliao1022 / Pepper3Dgenome
  ☆15Updated 2 years ago
• schmitzlab / Widespread-Long-range-Cis-Regulatory-Elements-in-the-Maize-Genome
  scripts used for processing and analyzing data in the article.
  ☆13Updated 5 years ago
• sunyumail93 / PipeRNAseq
  A comprehensive pipeline for RNAseq data analysis
  ☆22Updated 7 months ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆35Updated last month
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆30Updated last year
• LappalainenLab / lorals_paper_code
  ☆23Updated 2 years ago
• pinbo / SNP_Primer_Pipeline
  ☆21Updated 2 years ago
• lurebgi / chicken-T2T
  Scripts that used in our chicken T2T manuscript.
  ☆19Updated last year
• Iceylee / NGS-Pacbio
  Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.
  ☆9Updated 5 years ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• xinkaitong / 1k-pig-genomes
  Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences
  ☆13Updated last year
• caulilin / QTG_Seq
  ☆21Updated 6 years ago
• LAILAB-CAU / update-Mo17
  ☆24Updated 2 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆25Updated 2 years ago
• liangfan01 / pipeline-for-isoseq
  ☆14Updated 7 years ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• tsackton / ratite-genomics
  Scripts and other material for the assembly and analysis of ratite genomes.
  ☆26Updated 2 years ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆18Updated 3 years ago
• pangenome / pggb-workshop
  tutorial on pggb
  ☆34Updated 3 months ago
• YinYuan-001 / muntjac_code
  ☆10Updated 3 years ago
• wangzihell / CAU-TibetanWheatSeq
  Customized codes used in Tibetan wheat sequencing project.
  ☆13Updated 2 years ago
• hewm2008 / LDBlockShow
  LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
  ☆26Updated last year
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆25Updated 4 months ago
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆28Updated 4 years ago
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 4 years ago
• Uauy-Lab / WheatHomoeologExpression
  ☆15Updated 4 years ago
• yangqimeng99 / svlearn
  A machine learning-based genotyping tool for structural variation in short reads
  ☆18Updated last week
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆30Updated 3 years ago