genotoul-bioinfo / dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
☆103Updated 4 months ago
Alternatives and similar repositories for dgenies
Users that are interested in dgenies are comparing it to the libraries listed below
Sorting:
- Wally: Visualization of aligned sequencing reads and contigs☆115Updated 3 weeks ago
- Same species annotation lift over pipeline.☆97Updated last year
- A list of software for pangenomics☆111Updated this week
- Synteny Imager☆62Updated 8 months ago
- Interactive quality assessment of genome assemblies☆99Updated this week
- Research release basecalling models and configurations☆110Updated 10 months ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆102Updated last month
- ☆61Updated last month
- Dfam Transposable Element Tools Docker container.☆91Updated last week
- A program for assessing the T2T genome continuity☆73Updated 3 weeks ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆94Updated 2 months ago
- Simple pileup-based variant caller☆89Updated 2 weeks ago
- Assembly statistic visualisation☆90Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆57Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆55Updated 2 years ago
- SV caller for nanopore data☆91Updated 4 years ago
- source code for EVM☆109Updated 5 months ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆102Updated last year
- accurate LiftOver tool for new genome assemblies☆125Updated 9 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆96Updated last month
- PacBio BAM toolkit☆43Updated 2 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆81Updated 2 years ago
- ☆78Updated 4 years ago
- Pipeline to convert a haploid assembly into diploid☆100Updated 3 months ago
- Reference-free profiling of polyploid genomes☆115Updated 10 months ago
- Mapping pipeline for data generated using Arima-HiC☆76Updated 11 months ago
- Best practices and workflow for genome annotation☆77Updated last month
- Structural Variant Identification Method using Genome Assemblies☆114Updated 2 years ago