epi2me-labs / wf-16sLinks
☆31Updated 2 months ago
Alternatives and similar repositories for wf-16s
Users that are interested in wf-16s are comparing it to the libraries listed below
Sorting:
- ☆37Updated 2 months ago
- ☆51Updated 3 weeks ago
- Small variant calling for haploid samples☆37Updated last month
- Graph-based assembly phasing☆85Updated last month
- MycoSNP: Whole Genome Sequencing Analysis of Fungal Isolates☆69Updated last month
- De novo clustering of long transcript reads into genes☆66Updated 2 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆78Updated last month
- ☆28Updated last month
- Pipeline for the identification of (coding) gene structures in draft genomes.☆29Updated last year
- Hybrid error correction of long reads using colored de Bruijn graphs☆100Updated 9 months ago
- A Nextflow pipeline for evaluating assembly quality☆34Updated this week
- ✏️ Genome assembly polishing & SNV detection☆68Updated 4 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆42Updated 7 months ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- Correct and scaffold assemblies using long reads☆54Updated last year
- PECAT, a phased error correct and assembly tool☆53Updated this week
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆57Updated last year
- ☆63Updated 2 years ago
- Evaluating genome assemblies☆97Updated last week
- The stairway plot is a method for inferring detailed population demographic history using the site frequency spectrum (SFS) from DNA sequ…☆47Updated 2 years ago
- CLI tool to annotate genes with KOfam☆80Updated 2 years ago
- FastOMA is a scalable software package to infer orthology relationship.☆76Updated last week
- Detection of pseudogene candidates in bacterial and archaeal genomes.☆49Updated last year
- orthology assignment using phylogenetic and network analyses☆45Updated 3 months ago
- MCHelper: An automatic tool to curate transposable element libraries☆36Updated 2 months ago
- Ancient microbiome snakemake workflow☆25Updated 2 months ago
- Structural Variant Identification Method using Genome Assemblies☆120Updated 2 years ago
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆90Updated 11 months ago
- 🔗Genome assembly scaffolder using minimizer graphs☆83Updated 8 months ago
- Simple bacterial assembly and annotation pipeline☆75Updated 3 weeks ago