Alternatives and similar repositories for genomeannotator:

Users that are interested in genomeannotator are comparing it to the libraries listed below

• aljpetri / isONform
  De novo construction of isoforms from long-read data
  ☆26Updated 2 months ago
• EBI-Metagenomics / mobilome-annotation-pipeline
  ☆33Updated last week
• lemene / PECAT
  PECAT, a phased error correct and assembly tool
  ☆48Updated last month
• epi2me-labs / wf-amplicon
  ☆29Updated last week
• deweylab / detonate
  DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation
  ☆12Updated 8 years ago
• ksahlin / isONclust
  De novo clustering of long transcript reads into genes
  ☆56Updated 3 years ago
• dib-lab / genome-grist
  map Illumina metagenomes to genomes!
  ☆38Updated 2 months ago
• TimoLassmann / samstat
  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
  ☆24Updated last year
• rega-cev / virulign
  VIRULIGN: fast codon-correct alignment and annotation of viral genomes
  ☆32Updated 3 years ago
• rhysf / Diamond2GO
  ☆20Updated 6 months ago
• ablab / rnaquast
  Quality assessment of de novo transcriptome assemblies from RNA-Seq data
  ☆21Updated 3 months ago
• epi2me-labs / wf-16s
  ☆29Updated 2 months ago
• dib-lab / charcoal
  Remove contaminated contigs from genomes using k-mers and taxonomies.
  ☆56Updated last year
• gatech-genemark / GeneMark-ETP
  GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
  ☆20Updated 9 months ago
• at-cg / mm2-plus
  Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)
  ☆27Updated last month
• bcgsc / ntLink
  Minimizer-based assembly scaffolding and mapping using long reads
  ☆36Updated 4 months ago
• dubssieg / pancat
  Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions
  ☆33Updated 3 weeks ago
• LKremer / showTree
  showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
  ☆30Updated 5 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated last month
• rderelle / Broccoli
  orthology assignment using phylogenetic and network analyses
  ☆46Updated 4 months ago
• tobiasrausch / vc
  A tutorial on structural variant calling for short read sequencing data
  ☆27Updated 3 months ago
• mcfrith / last-genome-alignments
  ☆58Updated last year
• Dfam-consortium / FamDB
  FamDB file format library and utilities
  ☆20Updated last week
• FredHutch / gig-map
  Build a map of genes present across a set of microbial genomes
  ☆14Updated this week
• alejandrogzi / gxf2bed
  fastest GTF/GFF-to-BED converter chilling around
  ☆23Updated last month
• atifrahman / HAWK
  Hitting associations with k-mers
  ☆45Updated 2 years ago
• GonzalezLab / MCHelper
  MCHelper: An automatic tool to curate transposable element libraries
  ☆33Updated 2 months ago
• taxprofiler / taxpasta
  TAXnomic Profile Aggregation and STAndardisation
  ☆35Updated 3 months ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆30Updated 3 years ago
• Gabaldonlab / haplotypo
  This is the Haplotypo repository
  ☆20Updated 8 months ago