Comparison of multiple long read datasets
☆172Dec 2, 2025Updated 6 months ago
Alternatives and similar repositories for nanocomp
Users that are interested in nanocomp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An overview of all nanopack tools☆292Jun 2, 2023Updated 3 years ago
- Create statistic summary of an Oxford Nanopore read dataset☆138Nov 4, 2022Updated 3 years ago
- Plotting scripts for long read sequencing data☆554May 29, 2026Updated 2 weeks ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆185Jun 2, 2026Updated last week
- Quality control tools for nanopore sequencing data☆114Oct 26, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- quality filtering tool for long reads☆404Sep 17, 2025Updated 8 months ago
- Filtering and trimming of long read sequencing data☆217Jan 16, 2023Updated 3 years ago
- A genomic k-mer counter (and sequence utility) with nice features.☆167Jun 3, 2026Updated last week
- ☆254Jun 2, 2026Updated last week
- De novo construction of isoforms from long-read data☆36Jun 10, 2025Updated last year
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆240Dec 29, 2023Updated 2 years ago
- a long read simulator that can imitate many types of read problems☆289Apr 22, 2026Updated last month
- Variant calling tool for long-read sequencing data☆118Mar 19, 2025Updated last year
- A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework☆129Jan 8, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Tandem repeat expansion detection or genotyping from long-read alignments☆160Mar 25, 2026Updated 2 months ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆108Jan 17, 2026Updated 4 months ago
- Sequence correction provided by ONT Research☆517May 20, 2026Updated 3 weeks ago
- cDNA read preprocessing☆93Jul 25, 2024Updated last year
- Long read production pipelines☆151May 22, 2026Updated 3 weeks ago
- ☆49Jan 23, 2026Updated 4 months ago
- Splitting of sequence reads by internal adapter sequence search☆51May 30, 2023Updated 3 years ago
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆285Oct 18, 2024Updated last year
- De novo clustering of long transcript reads into genes☆79Apr 27, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆184Mar 25, 2026Updated 2 months ago
- Fast and accurately polish the genome generated by long reads.☆243Jan 9, 2025Updated last year
- haplotypic duplication identification tool☆288Oct 30, 2025Updated 7 months ago
- ☆104Updated this week
- Structural variation caller using third generation sequencing☆660May 18, 2026Updated 3 weeks ago
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆368May 28, 2026Updated 2 weeks ago
- Pan-genome wide association studies☆219May 29, 2024Updated 2 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆67Oct 11, 2024Updated last year
- Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.☆199Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Evaluating genome assemblies☆123Mar 3, 2026Updated 3 months ago
- SV detection tool for nanopore sequence reads☆97Mar 25, 2026Updated 2 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆112Jun 4, 2026Updated last week
- diploid SNV caller for error-prone reads☆210Apr 26, 2024Updated 2 years ago
- Evaluation and polishing workflows for T2T genome assemblies☆154Jun 2, 2026Updated last week
- A genome completeness evaluation tool based on miniprot☆245Sep 18, 2025Updated 8 months ago
- a short-read polishing tool for long-read assemblies☆217Sep 19, 2025Updated 8 months ago