Detection of phage RBPs based on protein domains and machine learning
☆34Feb 5, 2025Updated last year
Alternatives and similar repositories for PhageRBPdetection
Users that are interested in PhageRBPdetection are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pairwise machine learning models for phage-host interaction prediction☆23Jun 23, 2024Updated 2 years ago
- Code and database related to our manuscript "Predicting bacteriophage hosts based on receptor-binding proteins"☆13Nov 2, 2023Updated 2 years ago
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆61Jun 4, 2025Updated last year
- RBPseg: A Tool for Tail Fiber Structure Prediction☆16Jan 27, 2026Updated 8 months ago
- Phage Annotation using Protein Structures☆175Sep 17, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆20Nov 17, 2022Updated 3 years ago
- Python package for phage-host interaction prediction☆18Aug 31, 2026Updated 3 weeks ago
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆41Apr 20, 2026Updated 5 months ago
- multiPhATE with comparative genomics☆18Jun 26, 2026Updated 3 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆83Apr 16, 2025Updated last year
- Pharokka is a rapid standardised annotation tool for bacteriophage genomes and metagenomes.☆231Sep 17, 2026Updated last week
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding protein…☆17Jul 13, 2025Updated last year
- Throughput PhATE processing of draft or finished phage genomes☆14Apr 19, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆46Jun 1, 2026Updated 3 months ago
- Host prediction for phages☆29Nov 6, 2024Updated last year
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆86Sep 7, 2026Updated 2 weeks ago
- Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification☆15Sep 27, 2023Updated 3 years ago
- A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.