Alternatives and similar repositories for ProteinLanguageWorkshop

Users that are interested in ProteinLanguageWorkshop are comparing it to the libraries listed below

• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆59Updated last month
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆58Updated 5 months ago
• cmbi / dssp
  The DSSP building software
  ☆47Updated 2 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆52Updated last month
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆91Updated last year
• ncbi / SSDraw
  ☆85Updated last year
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆54Updated 7 months ago
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆82Updated 6 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated 2 years ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆40Updated 2 years ago
• BrooksResearchGroup-UM / PEVAE_Paper
  Deciphering protein evolution and fitness landscapes with latent space models
  ☆34Updated 3 years ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆111Updated 4 months ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆49Updated 2 weeks ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated 4 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆37Updated this week
• JudeWells / chainsaw
  ☆43Updated 11 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆53Updated last year
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆53Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆51Updated 2 weeks ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆68Updated 7 years ago
• UCLOrengoGroup / cath-alphaflow
  ☆22Updated 3 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆101Updated last month
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆26Updated 5 months ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆73Updated 8 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆53Updated 10 months ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆25Updated 3 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆76Updated 2 weeks ago