HIT-ImmunologyLab / DBSCAN-SWALinks
☆33Updated last year
Alternatives and similar repositories for DBSCAN-SWA
Users that are interested in DBSCAN-SWA are comparing it to the libraries listed below
Sorting:
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- Prophage Activity Estimator☆27Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 2 months ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆21Updated 9 months ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆38Updated 3 years ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆34Updated 2 years ago
- A python library for predicting phage lifestyle based on genome sequence☆37Updated 2 years ago
- A simple program to classify the lifestyle of phages.☆17Updated 2 years ago
- KEGG Module Evaluation Tool☆31Updated last year
- Unified Human Gut Virome Catalog☆36Updated last month
- A workflow and scripts for large-scale antiSMASH analyses☆42Updated 6 months ago
- ☆31Updated 7 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆22Updated last year
- Taxonomic classification of viruses at Order and Family level☆21Updated 2 years ago
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆24Updated 11 months ago
- Comparisons of multiple different prophage predictions☆26Updated 3 years ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆76Updated last week
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆35Updated last week
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆36Updated 9 months ago
- ☆58Updated last year
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Updated last year
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆34Updated 6 months ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated 5 months ago
- Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf☆49Updated last year
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆17Updated last year
- ☆16Updated 5 years ago
- Phage-Host Interaction Search Tool☆27Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆63Updated last week
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago