PAiewsakun / GRAViTyLinks
☆17Updated 3 years ago
Alternatives and similar repositories for GRAViTy
Users that are interested in GRAViTy are comparing it to the libraries listed below
Sorting:
- ☆32Updated 2 months ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆36Updated 11 months ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆20Updated 3 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆39Updated last year
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆20Updated 2 weeks ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆26Updated 3 weeks ago
- ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs☆37Updated last month
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆67Updated last week
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆35Updated 2 weeks ago
- ☆45Updated 2 years ago
- Microbial agile accurate SNP Typer☆29Updated last year
- snapper☆13Updated last year
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆48Updated 8 months ago
- Prophage Activity Estimator☆28Updated last year
- Predict prokaryotic host for phage metagenomic sequences☆52Updated last year
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆18Updated 2 years ago
- ☆33Updated last year
- A python library for predicting phage lifestyle based on genome sequence☆37Updated 2 years ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆94Updated 6 months ago
- A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes☆42Updated 2 years ago
- ☆52Updated 7 months ago
- Unified Human Gut Virome Catalog☆38Updated last month
- An algorithm for clustering metagenomic sequences.☆39Updated 8 months ago
- Set of utilities on sequences and BAM files☆26Updated 4 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated last year
- Bacterial GWAS analysis☆46Updated last month
- PHANOTATE: a gene caller for phages.☆79Updated last year
- Discover and annotate the virome☆54Updated last month
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆67Updated last year