A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.
☆50Jul 12, 2022Updated 4 years ago
Alternatives and similar repositories for awesome-phages
Users that are interested in awesome-phages are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WtP: Phage identification via nextflow and docker or singularity☆107Updated this week
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated 2 years ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆83Apr 16, 2025Updated last year
- Phigaro is a scalable command-line tool for predicting phages and prophages☆53Jan 8, 2024Updated 2 years ago
- A tool for identifying active prophage elements through read mapping☆14Oct 9, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- multiPhATE with comparative genomics☆18Jun 26, 2026Updated 2 months ago
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆86Sep 7, 2026Updated 2 weeks ago
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆46Jun 1, 2026Updated 3 months ago
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.☆130Aug 6, 2026Updated last month
- Prophage Activity Estimator☆35May 30, 2024Updated 2 years ago
- Virus Identification By iteRative ANnoTation☆204Apr 15, 2024Updated 2 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆23Dec 16, 2024Updated last year
- ccfind - circular complete genome finder with clues of terminal redundancy☆16Mar 5, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool for the identification of coincident (associating and dissociating) genes in pangenomes.☆112Oct 20, 2023Updated 2 years ago
- A healthy human gut genome collection☆26Aug 21, 2025Updated last year
- Bioinformatics tool to find integrons in bacterial genomes☆95May 7, 2025Updated last year
- ☆37Dec 6, 2023Updated 2 years ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆39Dec 20, 2024Updated last year
- ☆11Sep 16, 2020Updated 6 years ago
- Bacterial taxonomy construction and evaluation in R