single-cell latent diffusion model
☆64Nov 9, 2026Updated this week
Alternatives and similar repositories for scldm
Users that are interested in scldm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Distributed single-cell data analysis.☆40Updated this week
- ☆102Aug 10, 2026Updated 3 months ago
- ☆13Jun 9, 2025Updated last year
- Automatically annotate cell types, consistently across samples.☆30Updated this week
- Benchmarking pipeline for single-cell perturbation prediction tools☆38Jul 11, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Stack is a single-cell foundation model that enables in-context learning at inference time.☆172Apr 28, 2026Updated 6 months ago
- pytorch dataloaders for single-cell perturbation data☆56Jul 18, 2026Updated 3 months ago
- ☆52Updated this week
- ☆21May 29, 2026Updated 5 months ago
- Code for "Foundation Models Improve Perturbation Response Prediction"☆30Oct 22, 2026Updated 3 weeks ago
- ☆33Jan 22, 2025Updated last year
- Generative model for reconstruction of structures from cryoET☆19Nov 6, 2025Updated last year
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.☆18Updated this week
- Modeling complex perturbations with CellFlow☆11Jul 17, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆43Jun 8, 2026Updated 5 months ago
- Contrastive pre-training for technology-agnostic single-cell representations beyond reconstruction☆41Oct 15, 2026Updated 3 weeks ago
- ☆42Feb 24, 2026Updated 8 months ago
- MaxToki: an autoregressive single-cell language model built on BioNeMo/NeMo/Megatron.☆29Oct 28, 2026Updated 2 weeks ago
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆42Nov 6, 2026Updated last week
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆84Updated this week
- Single-cell differential expression☆22Nov 1, 2026Updated last week
- [ICLR 2026] scDFM: Distributional Flow Matching for Robust Single-Cell Perturbation Prediction☆65Sep 28, 2026Updated last month
- Single-cell perturbation analysis☆360Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆72Updated this week
- A model developed for the generation of scRNA-seq data☆96Jan 21, 2026Updated 9 months ago
- A Cellular Regulatory Network-Aware Transcriptomics Foundation Model☆38Dec 18, 2025Updated 10 months ago
- scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics☆52Jan 30, 2026Updated 9 months ago
- VariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations☆35May 3, 2026Updated 6 months ago
- Sample representation benchmark for single-cell data☆15Jun 12, 2026Updated 5 months ago
- ☆169Nov 6, 2025Updated last year
- ☆31Mar 12, 2026Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Modeling complex perturbations with CellFlow☆168Updated this week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- cz-benchmarks is a package for standardized evaluation and comparison of machine learning models for biological applications.☆59Dec 19, 2025Updated 10 months ago
- ☆33Apr 23, 2026Updated 6 months ago
- Simple scVI implementation☆13Updated this week
- ☆23Updated this week
- Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.☆135Updated this week
Are these results useful?