chaichontat / samuiLinks
A performant scientific image visualization system.
☆35Updated last week
Alternatives and similar repositories for samui
Users that are interested in samui are comparing it to the libraries listed below
Sorting:
- R API and htmlwidget for Vitessce☆41Updated 9 months ago
- ☆12Updated last year
- Single cell analysis in Javascript☆21Updated 9 months ago
- Extension of SpatialExperiment with sf☆55Updated 2 weeks ago
- ☆13Updated 2 months ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆22Updated 11 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 2 years ago
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆76Updated 3 weeks ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated last week
- ☆27Updated 9 months ago
- Spatial analysis toolkit for single cell multiplexed tissue data☆30Updated 10 months ago
- Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)☆11Updated 2 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆20Updated last week
- ☆44Updated 8 months ago
- ☆66Updated last month
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆21Updated last year
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 2 years ago
- An R package for performing cell typing in SMI and other single cell data☆37Updated last month
- Analyzing cellular niches in spatial transcriptomics data☆29Updated 7 months ago
- Python package to interactively annotate histological images within a jupyter notebook☆16Updated 8 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated 2 weeks ago
- Slides and Notebooks for scverse 2024☆17Updated 9 months ago
- ☆17Updated 2 months ago
- From geospatial to spatial -omics☆95Updated 4 months ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Code used for muti cellular factor analysis☆14Updated last year
- Read in Xenium, CosMx, Vizgen, STARmap PLUS, seqFISH data as Spatial or SingleCell Experiment object.☆14Updated 2 months ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago
- Interactive visualisation of CellphoneDB results☆10Updated 6 months ago