Computer simulator of multiplex tissue images from a set of user-defined parameters
☆10Dec 13, 2022Updated 3 years ago
Alternatives and similar repositories for Synplex
Users that are interested in Synplex are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- semi-reference-based short read compression☆11Mar 5, 2019Updated 7 years ago
- The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …☆19Apr 21, 2025Updated 11 months ago
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- ☆26Apr 8, 2025Updated 11 months ago
- ☆27Jun 4, 2023Updated 2 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- macOS menu bar app to check for COVID-19 vaccine availability at CVS stores.☆13Mar 24, 2021Updated 5 years ago
- ☆27Oct 23, 2025Updated 5 months ago
- nnSVG: scalable method to identify spatially variable genes (SVGs) in spatially-resolved transcriptomics data☆23May 19, 2025Updated 10 months ago
- Piecewise alignment for layers of mosaics☆42Feb 18, 2026Updated last month
- A flexible parser generator producing output from object-oriented hierarchical context-free grammar specifications.☆12Nov 16, 2021Updated 4 years ago
- Spectral unmixing of highly mixed multispectral flow and image cytometry data.☆17Mar 15, 2023Updated 3 years ago
- Scope2Screen is an open-source web-application for focus+context exploration and annotation of whole-slide, high-plex, tissue images.☆15Jun 1, 2023Updated 2 years ago
- ☆34Oct 10, 2025Updated 5 months ago
- An R package for feature selection in topological spaces.☆10Aug 12, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A performant scientific image visualization system.☆36Mar 20, 2026Updated last week
- Fully indexable dictionaries - access/rank/select operations☆13Sep 10, 2018Updated 7 years ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- A package for the analysis of Imaging Mass Cytometry data☆15Mar 5, 2026Updated 3 weeks ago
- FM-index for full-text search☆20Nov 20, 2021Updated 4 years ago
- GLSL shader for testing color science and palette generation algorithms interactively☆24Sep 24, 2021Updated 4 years ago
- Implementation of efficient Graph-based Image segmentation paper☆10May 19, 2020Updated 5 years ago
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆18Apr 10, 2015Updated 10 years ago
- image stacks in python (multi-page tiff), with depth color coding.☆19Jun 2, 2022Updated 3 years ago
- Generate a spatial catalogue from multiplexed imaging data☆16Jun 12, 2025Updated 9 months ago
- Spatial Single-Cell Analysis Toolkit☆110Mar 11, 2026Updated 2 weeks ago
- Collection of KNN algorithms in C++☆20Feb 26, 2026Updated last month
- Trained only with subject-level labels, NaroNet discovers phenotypes, neighborhoods, and areas with the highest influence when classifyin…☆20Dec 27, 2023Updated 2 years ago
- Single-cell Graph Cuts Optimization☆16Apr 27, 2024Updated last year
- Implementation of CDR - Interactive Visual Cluster Analysis by Contrastive Dimensionality Reduction☆21Apr 20, 2023Updated 2 years ago
- Simple color conversion and perceptual (DeltaE CIE 2000) difference☆13Mar 16, 2026Updated last week
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 3 years ago
- external memory data structure playground☆25Dec 15, 2011Updated 14 years ago
- pCMF R package☆14Apr 16, 2019Updated 6 years ago
- An example repo for packaging cppyy bindings for a simple k-nearest neighbors implementation, based on https://github.com/jclay/cppyy-kne…☆12Apr 10, 2019Updated 6 years ago
- ☆12Dec 12, 2018Updated 7 years ago
- ☆10Oct 30, 2018Updated 7 years ago
- An R package for fast topic inference to identify tissue architecture in multiplexed images☆15Mar 1, 2026Updated 3 weeks ago