☆63Jan 9, 2026Updated 9 months ago
Alternatives and similar repositories for maxfuse
Users that are interested in maxfuse are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆23Jan 9, 2026Updated 9 months ago
- A python package for Multiomics and Ecological Spatial Analysis (MESA)☆24Sep 30, 2026Updated 2 weeks ago
- ☆15Aug 17, 2023Updated 3 years ago
- ☆57Sep 2, 2026Updated last month
- Learning notes for DBiT-Notes☆12Nov 28, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Minimum Information about Tissue Imaging☆21Oct 18, 2023Updated 2 years ago
- ☆73Jan 18, 2023Updated 3 years ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated 2 years ago
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆16Feb 27, 2026Updated 7 months ago
- Pixie pipeline described in Liu et al., Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering☆14Aug 3, 2023Updated 3 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆19Apr 20, 2024Updated 2 years ago
- ☆19Apr 5, 2024Updated 2 years ago
- ☆37Oct 10, 2025Updated last year
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆37Jul 24, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources☆23May 28, 2026Updated 4 months ago
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- ☆136Aug 23, 2026Updated last month
- Graph-linked unified embedding for single-cell multi-omics data integration☆481Feb 9, 2026Updated 8 months ago
- CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data☆152Feb 20, 2025Updated last year
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆34Jul 24, 2025Updated last year
- This repository contains codes used for the human fetal limb cell atlas.☆17Jan 28, 2025Updated last year
- ☆10Apr 28, 2023Updated 3 years ago
- Code accompanying our manuscript "Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive f…☆77Nov 4, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆42Jun 7, 2026Updated 4 months ago
- PyTorch implementation of the MIDAS algorithm for single-cell multimodal data integration (Nature Biotechnology 2024).☆74May 10, 2026Updated 5 months ago
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆105Feb 11, 2026Updated 8 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆66Mar 14, 2024Updated 2 years ago
- An R package for performing cell typing in SMI and other single cell data☆56May 1, 2026Updated 5 months ago
- ☆13Jun 6, 2024Updated 2 years ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated 2 years ago
- Implementation of CellNEST method☆70Jun 23, 2026Updated 3 months ago
- Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms☆206Jan 30, 2026Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆44May 11, 2026Updated 5 months ago
- Python package implementing our method MatchCLOT for multimodal single-cell data integration☆15May 19, 2023Updated 3 years ago
- Learning cell communication from spatial graphs of cells☆121Jan 15, 2024Updated 2 years ago
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆16Aug 15, 2024Updated 2 years ago
- ☆175Dec 20, 2024Updated last year
- ☆12Jan 12, 2024Updated 2 years ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆57Sep 2, 2026Updated last month