Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data
☆20Jan 26, 2026Updated 2 months ago
Alternatives and similar repositories for Vesalius
Users that are interested in Vesalius are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Seqscope codes☆11Nov 28, 2021Updated 4 years ago
- TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.☆41Mar 18, 2022Updated 4 years ago
- General notes and resources on how to analyze Spatial Transcriptomics data☆12Jun 20, 2023Updated 2 years ago
- ☆11Feb 18, 2019Updated 7 years ago
- ☆16May 25, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A fast python class for reading 2-bit files (used by UCSC genome browser)☆14Oct 10, 2025Updated 6 months ago
- SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection☆17Apr 26, 2021Updated 4 years ago
- ☆13Dec 23, 2021Updated 4 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 4 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- Spatially aware dimension reduction for spatial transcriptomics.☆65Mar 18, 2025Updated last year
- Genomic signature interpretation tool for DNA double-strand break repair mechanism☆11Oct 8, 2025Updated 6 months ago
- ☆10Mar 15, 2024Updated 2 years ago
- ☆10Nov 30, 2024Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- single-cell latent diffusion model☆46Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- A study of performance of optimal transport.☆10Jul 4, 2020Updated 5 years ago
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆11Jul 25, 2024Updated last year
- Code for the image processing and analysis described our Nature Protocols paper.☆10Jun 26, 2015Updated 10 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Nov 25, 2024Updated last year
- ☆11Sep 24, 2020Updated 5 years ago
- ☆16Oct 18, 2023Updated 2 years ago
- Tool kit to accelerate exploratory data analysis and data cleaning☆11Mar 22, 2021Updated 5 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Jul 13, 2018Updated 7 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆10Oct 27, 2023Updated 2 years ago
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Oct 21, 2022Updated 3 years ago
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆24Sep 29, 2025Updated 6 months ago
- ☆12Jul 15, 2022Updated 3 years ago
- A basic tutorial on HDC☆17Sep 30, 2022Updated 3 years ago
- ☆11Apr 11, 2023Updated 3 years ago
- VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas☆15Nov 6, 2024Updated last year
- Single-cell Graph Cuts Optimization☆16Apr 27, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The ultimate search extension for R☆16Sep 27, 2020Updated 5 years ago
- Automatic Integration for Neural Spatio-Temporal Point Process models (AI-STPP) is a new paradigm for exact, efficient, non-parametric inf…☆25Oct 14, 2024Updated last year
- Generated color schemes for sequence alignment visualizations☆18Jul 20, 2022Updated 3 years ago
- Monte Carlo Reference-based Consensus Clustering☆37Mar 14, 2020Updated 6 years ago
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆16Mar 13, 2026Updated 3 weeks ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Sep 20, 2022Updated 3 years ago
- ☆16Feb 29, 2024Updated 2 years ago