rna2seg
☆25May 15, 2025Updated last year
Alternatives and similar repositories for rna2seg
Users that are interested in rna2seg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Jupyter notebook based multiplex image processing pipeline.☆10May 31, 2026Updated 2 weeks ago
- comseg☆24Feb 6, 2025Updated last year
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Sep 18, 2023Updated 2 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Jul 6, 2023Updated 2 years ago
- The Vizgen Post-processing Tool (VPT) enables users to reprocess and refine the single-cell results of MERSCOPE experiments.☆38Apr 30, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Accurate and efficient spot detection for microscopy data☆130Feb 5, 2026Updated 4 months ago
- ☆33Dec 30, 2025Updated 5 months ago
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated 2 years ago
- ☆27Apr 8, 2025Updated last year
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 3 years ago
- Deep learning based spot detection for FISH images.☆34Jan 7, 2026Updated 5 months ago
- ☆225Feb 4, 2026Updated 4 months ago
- Lab for quantitative bioimage analysis experiments in Python☆19Feb 16, 2026Updated 3 months ago
- ☆16Sep 8, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆39Feb 6, 2026Updated 4 months ago
- Block-wise operations for large nD volumes☆45Jun 4, 2026Updated last week
- A relabeling tool for tiled segmentation with Dask☆17Sep 24, 2024Updated last year
- Spatial One☆30Oct 31, 2024Updated last year
- ☆11May 6, 2024Updated 2 years ago
- ☆17Mar 26, 2026Updated 2 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Jan 6, 2023Updated 3 years ago
- Spatial analysis of FISH data☆33Jun 5, 2026Updated last week
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆87Nov 16, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Build contrasts for models defined with formulaic☆13Updated this week
- A performant scientific image visualization system.☆36Jun 4, 2026Updated last week
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆13Dec 7, 2022Updated 3 years ago
- ☆17Jun 27, 2024Updated last year
- a cutting-edge cell segmentation model specifically designed for single-molecule resolved spatial omics datasets. It addresses the challe…☆89May 25, 2026Updated 2 weeks ago
- Fusion strategies to build multimodal predictors for the prediction of immunotherapy response in non-small cell lung cancer☆15Jan 13, 2025Updated last year
- Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics☆20Feb 25, 2026Updated 3 months ago
- ☆12Jul 25, 2019Updated 6 years ago
- ☆24Jun 5, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Optimal gating strategies for flow and mass cytometry.☆16Nov 5, 2025Updated 7 months ago
- Computational framework for dataset integration☆11Jul 21, 2023Updated 2 years ago
- This page hosts NeKo, a python package that allow the user to automatically build gene regulatory networks from any databases.☆20May 22, 2026Updated 3 weeks ago
- Single-cell spatial omics analysis that makes you happy!☆65Updated this week
- ☆27Apr 29, 2026Updated last month
- A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.☆37May 19, 2026Updated 3 weeks ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆22May 22, 2026Updated 3 weeks ago