bilayer-containers / bilayersLinks
☆11Updated this week
Alternatives and similar repositories for bilayers
Users that are interested in bilayers are comparing it to the libraries listed below
Sorting:
- Python API and Jupyter widget for Vitessce☆50Updated this week
- Fast reconstruction of spatial networks from bioimages.☆25Updated 3 months ago
- Minimum Information about Tissue Imaging☆20Updated last year
- Graph-based Decoding for In Situ Sequencing☆10Updated 5 years ago
- A web-based, time-series visualizer for tracked segmented data.☆12Updated this week
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆11Updated last year
- An application to display spatial and single-cell experiment data. Built in React, on the Vitessce framework.☆14Updated last year
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆47Updated 2 weeks ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆28Updated this week
- Optimal gating strategies for flow and mass cytometry.☆13Updated 3 months ago
- A plugin to visualise 3D spatial single cell omics☆22Updated last month
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆19Updated 2 weeks ago
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆13Updated 3 weeks ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 2 years ago
- ☆29Updated last year
- rna2seg☆17Updated 2 months ago
- Framework for image and flow cytometry analysis☆28Updated this week
- Image registration (alignment) software for large microscopy images☆25Updated last year
- Build contrasts for models defined with formulaic☆13Updated this week
- Static plotting for spatialdata☆62Updated this week
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆21Updated last month
- Analysis of data produced by cvapipe for the variance paper☆23Updated 7 months ago
- A toolkit to quantify cell dynamics in living tissues☆11Updated 6 years ago
- ☆12Updated 3 months ago
- ☆65Updated this week
- ☆27Updated 9 months ago
- Interface to the Bioformats Java library☆13Updated 2 weeks ago
- Whole slide image registration through wsireg in napari.☆13Updated 2 years ago
- MERlin is an extensible analysis pipeline applied to decoding MERFISH data☆35Updated 3 years ago
- Automatically annotate cell types, consistently across samples.☆14Updated this week