cortex-lab / widefieldLinks
Image processing and tools for widefield imaging
☆19Updated 6 years ago
Alternatives and similar repositories for widefield
Users that are interested in widefield are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Histology processing☆72Updated last month
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- ☆52Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated last month
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Browser-based NWB visualization and DANDI exploration☆62Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆56Updated 2 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 2 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 2 weeks ago
- IBL core shared libraries☆66Updated last week
- Tools to process widefield data☆20Updated 4 months ago
- Python package to handle probe layout, geometry and wiring to device.☆76Updated last week
- A curated list of awesome Neuropixels resources.☆122Updated last month
- ☆41Updated 4 years ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- Tools for processing 2P recordings☆131Updated 2 years ago
- A MATLAB toolbox for interacting with the Allen Brain Observatory☆22Updated 5 months ago
- Collection of probe description for probeinterface☆17Updated this week
- cortex lab code for electrophysiology☆85Updated last year
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Region Of Interest Classification and Tracking☆27Updated last week