cortex-lab / widefieldLinks
Image processing and tools for widefield imaging
☆19Updated 6 years ago
Alternatives and similar repositories for widefield
Users that are interested in widefield are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆27Updated 4 months ago
- ☆52Updated last year
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Tools to process widefield data☆20Updated 5 months ago
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆67Updated last month
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆28Updated 4 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated last month
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- Histology processing☆72Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Tools for processing 2P recordings☆131Updated 2 years ago
- Calcium imaging inter-session alignment☆15Updated last month
- IBL core shared libraries☆66Updated this week
- Registration of cells across sessions.☆76Updated last year
- Collection of probe description for probeinterface☆17Updated last week
- A MATLAB toolbox for interacting with the Allen Brain Observatory☆22Updated 5 months ago
- Analysis of ultrasonic vocalizations from mice using computer vision and machine learning☆27Updated 2 years ago
- A curated list of awesome Neuropixels resources.☆124Updated last month