Extract regions of interest based on correlated pixel intensity
☆24May 9, 2017Updated 8 years ago
Alternatives and similar repositories for CalciumSignalExtract
Users that are interested in CalciumSignalExtract are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complete Matlab pipeline for large scale calcium imaging data analysis☆260Jul 4, 2023Updated 2 years ago
- Collaborative Approach for eNhanced Denoising under Low-light Excitation☆20Jun 5, 2025Updated 10 months ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆35Apr 9, 2020Updated 6 years ago
- perspective-correct VR for freely moving animals engine☆17Mar 7, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Convolutive Matrix Factorization in Julia☆10Mar 7, 2021Updated 5 years ago
- UCLA Multiphoton Miniature Microscope☆17May 19, 2025Updated 10 months ago
- A GUI and library for doing multi-fiber photometry☆18Oct 12, 2017Updated 8 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 4 years ago
- Preprocessing toolbox for rat rs-fMRI data☆12Mar 16, 2022Updated 4 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 6 years ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14May 28, 2019Updated 6 years ago
- ☆43Sep 29, 2021Updated 4 years ago
- Pytorch implementation of LocaNMF☆37Feb 17, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Apr 29, 2024Updated last year
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Aug 12, 2024Updated last year
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Jan 4, 2026Updated 3 months ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- Python implementation of ImageJ Cell Magic Wand tool☆11Oct 28, 2016Updated 9 years ago
- Set of matlab functions for EEG io, preprocessing, analysis from the Center for Sleep and Consciousness, University of Wisconsin (csc)☆20Feb 15, 2022Updated 4 years ago
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.☆20Mar 11, 2025Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆28May 22, 2022Updated 3 years ago
- A Matlab application for electrophysiology data analysis☆22Apr 4, 2025Updated last year
- Data and example scripts used in the paper `Inferring hidden structure in multilayered neural circuits`☆15Sep 11, 2021Updated 4 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 6 years ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Oct 26, 2022Updated 3 years ago
- cell detection in calcium imaging recordings☆440Apr 5, 2026Updated last week
- ☆14Jan 12, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pre-processing pipeline for widefield data☆12Dec 11, 2020Updated 5 years ago
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year
- ☆13Aug 7, 2020Updated 5 years ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 4 years ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆722Apr 2, 2026Updated last week
- How to build a simple alignment laser for typical optical alignment tasks.☆17Dec 9, 2024Updated last year