Extract regions of interest based on correlated pixel intensity
☆24May 9, 2017Updated 9 years ago
Alternatives and similar repositories for CalciumSignalExtract
Users that are interested in CalciumSignalExtract are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complete Matlab pipeline for large scale calcium imaging data analysis☆262Jul 4, 2023Updated 3 years ago
- Blazing fast calcium imaging analysis toolbox☆21Jun 20, 2017Updated 9 years ago
- A simple GUI for automatic and manual alignment across calcium imaging sessions.☆15Jul 2, 2026Updated 3 weeks ago
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- Convolutive Matrix Factorization in Julia☆10Mar 7, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Visual Coding 2P analysis code☆18Jun 3, 2020Updated 6 years ago
- A GUI and library for doing multi-fiber photometry☆19Oct 12, 2017Updated 8 years ago
- perspective-correct VR for freely moving animals engine☆17Mar 7, 2023Updated 3 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14May 28, 2019Updated 7 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Sep 14, 2023Updated 2 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 7 years ago
- ☆42Sep 29, 2021Updated 4 years ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Jan 4, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pytorch implementation of LocaNMF☆37Feb 17, 2020Updated 6 years ago
- UCLA Multiphoton Miniature Microscope☆17May 19, 2025Updated last year
- Low friction belt treadmill for use in space constrained experimental rigs☆17May 22, 2026Updated 2 months ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆45Aug 12, 2024Updated last year
- Motion Tracking☆14Jan 12, 2023Updated 3 years ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated 5 months ago
- Set of matlab functions for EEG io, preprocessing, analysis from the Center for Sleep and Consciousness, University of Wisconsin (csc)☆20Feb 15, 2022Updated 4 years ago
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.☆20Mar 11, 2025Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆27May 22, 2022Updated 4 years ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 7 years ago
- ☆21Aug 10, 2019Updated 6 years ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆12Mar 3, 2023Updated 3 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆105Mar 14, 2019Updated 7 years ago
- 2D image registration in python, using napari.☆16Dec 7, 2021Updated 4 years ago
- ☆13Aug 7, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 6 years ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆16May 20, 2025Updated last year
- Real-Time Light Field 3D Microscopy via Sparsity-Driven Learned Deconvolution☆11Nov 2, 2022Updated 3 years ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Oct 26, 2022Updated 3 years ago
- Jax implementation of normcorre☆15Jan 25, 2025Updated last year
- ☆14Jan 12, 2022Updated 4 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆159May 29, 2022Updated 4 years ago