Extract regions of interest based on correlated pixel intensity
☆24May 9, 2017Updated 9 years ago
Alternatives and similar repositories for CalciumSignalExtract
Users that are interested in CalciumSignalExtract are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collaborative Approach for eNhanced Denoising under Low-light Excitation☆20Sep 2, 2026Updated last month
- Blazing fast calcium imaging analysis toolbox☆21Jun 20, 2017Updated 9 years ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆261Jul 4, 2023Updated 3 years ago
- A simple GUI for automatic and manual alignment across calcium imaging sessions.☆15Jul 2, 2026Updated 3 months ago
- Convolutive Matrix Factorization in Julia☆10Mar 7, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Visual Coding 2P analysis code☆18Jun 3, 2020Updated 6 years ago
- A GUI and library for doing multi-fiber photometry☆19Oct 12, 2017Updated 9 years ago
- perspective-correct VR for freely moving animals engine☆17Mar 7, 2023Updated 3 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14May 28, 2019Updated 7 years ago
- Preprocessing toolbox for rat rs-fMRI data☆12Mar 16, 2022Updated 4 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 7 years ago
- ☆43Sep 29, 2021Updated 5 years ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Jan 4, 2026Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆16Apr 29, 2024Updated 2 years ago
- Pytorch implementation of LocaNMF☆37Feb 17, 2020Updated 6 years ago
- UCLA Multiphoton Miniature Microscope☆18May 19, 2025Updated last year
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆46Aug 12, 2024Updated 2 years ago
- Low friction belt treadmill for use in space constrained experimental rigs☆18May 22, 2026Updated 4 months ago
- Motion Tracking☆13Jan 12, 2023Updated 3 years ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- Python implementation of ImageJ Cell Magic Wand tool☆11Oct 28, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Data and example scripts used in the paper `Inferring hidden structure in multilayered neural circuits`☆15Sep 11, 2021Updated 5 years ago
- A Matlab application for electrophysiology data analysis☆22Apr 4, 2025Updated last year
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.☆20Mar 11, 2025Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆27May 22, 2022Updated 4 years ago
- ☆21Aug 10, 2019Updated 7 years ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆12Mar 3, 2023Updated 3 years ago
- cell detection in calcium imaging recordings☆472Sep 12, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 2D image registration in python, using napari.☆16Dec 7, 2021Updated 4 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆106Mar 14, 2019Updated 7 years ago
- ☆13Aug 7, 2020Updated 6 years ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆16May 20, 2025Updated last year
- Real-Time Light Field 3D Microscopy via Sparsity-Driven Learned Deconvolution☆11Nov 2, 2022Updated 3 years ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Oct 26, 2022Updated 3 years ago
- Jax implementation of normcorre☆15Jan 25, 2025Updated last year