cortex-lab / allenCCFLinks
Tools to work with Allen Inst CCF data in matlab
☆143Updated 5 months ago
Alternatives and similar repositories for allenCCF
Users that are interested in allenCCF are comparing it to the libraries listed below
Sorting:
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 8 months ago
- Histology processing☆71Updated last week
- Registration of cells across sessions.☆75Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆100Updated last week
- A curated list of awesome Neuropixels resources.☆121Updated last week
- ☆52Updated last year
- pyqt5 dependent applications for IBL sessions☆32Updated 2 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last month
- cortex lab code for electrophysiology☆85Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 7 months ago
- a visualization method for neural data☆240Updated 8 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated last week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- ☆18Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆12Updated last month
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 2 months ago
- Information about Neuropixels electrode arrays☆96Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆76Updated this week
- GPU code for spike sorting☆189Updated last year
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 3 weeks ago
- Tools for processing 2P recordings☆130Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago