cortex-lab / allenCCFLinks
Tools to work with Allen Inst CCF data in matlab
☆143Updated 4 months ago
Alternatives and similar repositories for allenCCF
Users that are interested in allenCCF are comparing it to the libraries listed below
Sorting:
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- Registration of cells across sessions.☆75Updated last year
- Histology processing☆71Updated 2 months ago
- A curated list of awesome Neuropixels resources.☆120Updated 2 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆99Updated this week
- cortex lab code for electrophysiology☆85Updated last year
- pyqt5 dependent applications for IBL sessions☆31Updated 2 months ago
- a visualization method for neural data☆239Updated 8 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last week
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 6 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 2 weeks ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆29Updated 4 months ago
- ☆52Updated last year
- GPU code for spike sorting☆189Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated 11 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆75Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆72Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 2 weeks ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆60Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆41Updated 4 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 4 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated last month
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- Information about Neuropixels electrode arrays☆96Updated 11 months ago