cortex-lab / allenCCFLinks
Tools to work with Allen Inst CCF data in matlab
☆145Updated 6 months ago
Alternatives and similar repositories for allenCCF
Users that are interested in allenCCF are comparing it to the libraries listed below
Sorting:
- Histology processing☆72Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Registration of cells across sessions.☆76Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- cortex lab code for electrophysiology☆85Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆66Updated 2 months ago
- ☆52Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- GPU code for spike sorting☆189Updated last year
- a visualization method for neural data☆241Updated 10 months ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Information about Neuropixels electrode arrays☆96Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 2 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆15Updated 3 weeks ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆15Updated 7 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago